Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgcaattcaccggattctgtttaatggattttttttgtgttggttgtgactattatagtccttactgtttcttgtcaattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG

Basic information

species Glycine max
transcript GLYMA04G36870.1
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G36870.1 (Glycine max), 3'ss of exon 6
lower sequence: LOC_Os04g40950.1 (Oryza sativa), 3'ss of exon 6
---------------------gtttgcaattcaccggattctgtttaatggattttttttgtgttggttgtgactattatagtccttactgtttcttgtcaattt-------tgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG
                       |||         | |   ||| |  ||   | ||      |||||    ||||  |||        |||  ||| |||| ||       ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||||
gtgtgttcctcactcattttcacttgtctactgttgcaaattgtgtggtga--tgttaagaaattggtcactactaccatatgaagccttgtc-cttatcaaattgtctgcctgcagGTTATCAATGACAGGTTTGGTATTGTTGAGGGTTTGATGACCACTGTCCATGCAATCACTG

upper sequence: GLYMA04G36870.1 (Glycine max), 3'ss of exon 6
lower sequence: LOC_Os02g38920.1 (Oryza sativa), 3'ss of exon 6
gtttgcaattcaccggattctgtttaatggat-tttttttgtgttggttgtgactattatagtcctta-ctgtttcttgtcaattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG
    |   ||   | |||    |||   |  |  |  | || |   || |  |||| |  |||  | | ||     ||     | || ||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||
----gtgtttattctgatataatttggcgcctgctcctgtgcgcatgtagctactactggagttttaagctaacattttgtcttgttacagGTCATCAATGACAGATTTGGCATCGTTGAGGGTTTGATGACCACTGTCCATGCCATCACTG

upper sequence: GLYMA04G36870.1 (Glycine max), 3'ss of exon 6
lower sequence: GRMZM2G071630_T02 (Zea mays), 3'ss of exon 5
gtttgcaattcaccggattctgttta-atggattttttttgtgttggttgtgactattatagtccttactgtttcttgtcaattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG
||    |  |  |   |  ||| | | ||  |||  | ||  |     | | | |||  ||   ||   |  || || |   |  ||||||| |||||||||| ||| || |||||||||||| ||||||||||||||||| |||||||||
gtgcttatgttgcttta--ctgctgacataaattgctcttaggcattctat-attatc-taaaactggttacttttttttt-tgctgcagGTCATCAATGACAAGTTCGGTATTGTTGAGGGTCTGATGACCACTGTTCATGCCATCACTG

upper sequence: GLYMA04G36870.1 (Glycine max), 3'ss of exon 6
lower sequence: GRMZM2G046804_T02 (Zea mays), 3'ss of exon 6
----gtttgcaattcaccggattctgtttaatggattttttttgtgttggttgtgactattatagtccttactgtttcttgtcaattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG
      |  |  |           | | ||   | || |  |  |      |  ||  |||   ||      ||| |  ||||| |    ||||| ||  ||||||  || ||||||||||||||||||||||| ||||||||| |||||||||
gtgcactgtccttctcttaagcattctgtagctgtttctgctcttccaatgtaggatcattt--gttaacgatgtctagtgtca-taaaccagGTCATTCATGACAACTTCGGCATTGTTGAGGGTTTGATGACAACTGTTCATGCCATCACTG

upper sequence: GLYMA04G36870.1 (Glycine max), 3'ss of exon 6
lower sequence: GRMZM2G176307_T01 (Zea mays), 3'ss of exon 6
--gtttgcaattcaccggattctgtttaatggattttttttgtgttggttgtgactattatagtccttactgtttcttgtcaattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG
  | ||     | |     | |||    ||  |||  | ||  |     | |  |   || | |       ||| ||| |   |  ||||||| |||||||||| ||| || || ||||||||| ||||||||||||| ||| |||||||||
gtgcttatg-ctgatttactgctgcc--ataaattgctcttagggatcctatatcacctaaaattg-----gttacttatttttgctgcagGTCATCAATGACAAGTTCGGTATCGTTGAGGGTCTGATGACCACTGTCCATGCCATCACTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|24135894|gb|BU926404.1|BU926404
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16284095|gb|BI945903.1|BI945903
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16284488|gb|BI946116.1|BI946116
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|15589892|gb|BI674508.1|BI674508
EST:     TTATTTCCCATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGGTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|193454911|gb|FK421240.1|FK421240
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16278496|gb|BI942934.1|BI942934
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATG
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATG
EST: gi|16280046|gb|BI943754.1|BI943754
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|24206084|gb|BU965337.1|BU965337
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16277611|gb|BI942471.1|BI942471
EST:     TTATGTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTT
EST: gi|254319963|gb|GR829259.1|GR829259
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|193528392|gb|FK483936.1|FK483936
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|213599959|gb|DB966461.1|DB966461
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16279430|gb|BI943432.1|BI943432
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|207732638|gb|GD708119.1|GD708119
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16279128|gb|BI943272.1|BI943272
EST:     TATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCCAAG                         -TTATCAATGACAGGTTTGGCATTGATGANGGTTTGATGACCACTGGTCA
genomic: TATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCC-AAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCA
EST: gi|208093197|gb|GD895204.1|GD895204
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|22525091|gb|BU083902.1|BU083902
EST:     TTATTTCCAATGCTAGCTGCACGACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|42722894|gb|CK768793.1|CK768793
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16277273|gb|BI942295.1|BI942295
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAAGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|213611924|gb|DB960712.1|DB960712
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|15201181|gb|BI424736.1|BI424736
EST:     TATTTTCCA-TGGTAGCTGCACAACCAACTGCCTTGTCCCGCTCCCCCAG                         GGTATCAATGACAAGGTT-GGCATT
genomic: TATTT-CCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACA-GGTTTGGCATT
EST: gi|120491270|gb|EH219437.1|EH219437
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|120534237|gb|EH262370.1|EH262370
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|208265965|gb|GE061388.1|GE061388
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|151405695|gb|EV275509.1|EV275509
EST:     TTATTTCCAATGCTAGCTACACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16279578|gb|BI943508.1|BI943508
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|17519507|gb|BM188549.1|BM188549
EST:     TGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|120534108|gb|EH262241.1|EH262241
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16105674|gb|BI893414.1|BI893414
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16282130|gb|BI944853.1|BI944853
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|207815439|gb|GD789080.1|GD789080
EST:     TATTTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TA-TTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|254329018|gb|GR833390.1|GR833390
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16277410|gb|BI942365.1|BI942365
EST:     TTATGTGCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGGCAAA                         GTTATCAATGACAGGTTTGGCATTGGTGAGGGT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGT
EST: gi|208324538|gb|GE122731.1|GE122731
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16278309|gb|BI942835.1|BI942835
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTTGT-GAGGGTTTGATGACCACTGTTCA
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATT-GTTGAGGGTTTGATGACCACTGTTCA
EST: gi|24136530|gb|BU927040.1|BU927040
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGGTTGGCATTGTTGAGGGTTTGATGACCACTGGTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|15814926|gb|BI787201.1|BI787201
EST:     TATTTCCAATGCTAGCTGCACAAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAAATGACAGGTTTTGGCATTGTTGAGGGTTTGATGACCACTGTTC
genomic: TATTTCCAATGCTAGCTGCACAA-CCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAA-TGACAGGTTT-GGCATTGTTGAGGGTTTGATGACCACTGTTC
EST: gi|16283995|gb|BI945850.1|BI945850
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16277862|gb|BI942602.1|BI942602
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16276881|gb|BI942092.1|BI942092
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGGTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|18038785|gb|BM307079.1|BM307079
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|193460805|gb|FK427574.1|FK427574
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGAC
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGAC
EST: gi|16276985|gb|BI942144.1|BI942144
EST:     TTATTTGCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCCATGACAGGTTTGGCATTGTTGAGGGTTTGAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGAT
EST: gi|16277574|gb|BI942451.1|BI942451
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|26047478|gb|CA784257.1|CA784257
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|23056251|gb|BU577710.1|BU577710
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
EST: gi|16277942|gb|BI942644.1|BI942644
EST:     TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAG                         GTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT
genomic: TTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGgtttgcaatt ... aattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttttgtgttggttgtgactattatagtccttactgtttcttgtcaattttgcagGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTG
                           tccttac  putative branch site (score: 2)
                 actattata  TA-rich tract