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TGAGAGACATGATTCTGATGGGAAATCACATATTGTTCTGGAGTCATATCCACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttaccagtgttaactttctcagcatgcaaattaatggaacttggttaaatttaggtatcagtaacatttccatgaaattgaatgtgttatagttt...
species | Glycine max |
transcript | GLYMA20G02570.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATA GTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTGEST: gi|298188362|gb|HO035055.1|HO035055
genomic: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttacc ... tgtgatccagGTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTG
EST: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACACA GTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTGEST: gi|192295612|gb|FG990466.1|FG990466
genomic: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttacc ... tgtgatccagGTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTG
EST: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATA GTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTGEST: gi|151403392|gb|EV273202.1|EV273202
genomic: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttacc ... tgtgatccagGTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTG
EST: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATA GTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTGEST: gi|209710530|gb|BW662066.1|BW662066
genomic: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttacc ... tgtgatccagGTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTG
EST: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATA GTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTG
genomic: CACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttacc ... tgtgatccagGTTAATTATAATGGCGAGGATTTGCCCCTGCCTTTCAACTTTGAGATCCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGAGACATGATTCTGATGGGAAATCACATATTGTTCTGGAGTCATATCCACCATGTGATAGCATCAAGGTTTTGGAGCAAGCTCTTGTAAATAACATAgtgagttaccagtgttaactttctcagcatgcaaattaatggaacttggttaaatttaggtatcagtaacatttccatgaaattgaatgtgttatagttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT