1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAAGCGTGTGCCATCTGAAAGGTGTGCAGAGCTGACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagcattgatattaccaatatacttctgtttaaatatgccgccatttttcaatgtttgtgcctccatagattctctgtatttcgtacagtgaatc...
species | Glycine max |
transcript | GLYMA18G47960.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTAEST: gi|192305184|gb|FG993950.1|FG993950
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
EST: ACTATTATTGCTGCAACTCACGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTAEST: gi|209725123|gb|BW663063.1|BW663063
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
EST: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTAEST: gi|11117943|gb|BF219536.1|BF219536
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
EST: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTAEST: gi|254342710|gb|GR858872.1|GR858872
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
EST: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGEST: gi|31306857|gb|CD392060.1|CD392060
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGG
EST: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTAEST: gi|5057637|gb|AI736113.1|AI736113
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
EST: TGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTAEST: gi|9983116|gb|BE657224.1|BE657224
genomic: TGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
EST: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCA GCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
genomic: ACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagca ... tttgagtgcaGCCTGTGCTTGCTGTCATGTATCTCGTTCAGTACATGCCAACTATTGGTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGCGTGTGCCATCTGAAAGGTGTGCAGAGCTGACTATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAggtaaaagcattgatattaccaatatacttctgtttaaatatgccgccatttttcaatgtttgtgcctccatagattctctgtatttcgtacagtgaatc
- - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA