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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCGACGCCTGGCCGCGGCAGTCGGACCTGAGTTCGCTGCGCGTGCTGGCGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggagagaggttatgcggaggtggaggggaggagcaggaggcggagtgtctgtcgtgcatcgcggttcaaccggcttactcacaattacacgaactgcttgggctgcggcatcgaatactcatcgcctggtgtcgcactgcctccaacctcctctccccgctcgccgccccggcctgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO97232
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|49467332|gb|BP095245.1|BP095245
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTG
EST: gi|6546389|gb|AV392173.1|AV392173
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|49468514|gb|BP096375.1|BP096375
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|10788393|gb|AV626113.1|AV626113
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|49468891|gb|BP096752.1|BP096752
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|49470802|gb|BP098663.1|BP098663
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|49470841|gb|BP098702.1|BP098702
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|49469160|gb|BP097021.1|BP097021
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
EST: gi|49465039|gb|BP092952.1|BP092952
EST:     CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAG                         GTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG
genomic: CGTCGGCGGGCGAGCCCATGAACGAGCACGCCTGGCACTGGTTCCACGAGgtgagggaga ... cggcctgcagGTGGTTGGCAGCAGCCGCTGCCCGGTGGTGGACACGTGGTGGCAGACGGAG