1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGACTTGTCCAGTAATACATTGAGTGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgattttttatttggataaattcatctaattgttatgaaaagttgatgactcagatacaaatcatttacctgcaaccttgtgcag
species | Zea mays |
transcript | GRMZM5G886952_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AGCGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATCATT CAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACTEST: gi|32825445|gb|CD965167.1|CD965167
genomic: AGTGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgatt ... ccttgtgcagCAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACT
EST: GATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATCATT CAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACTEST: gi|31354140|gb|CD438497.1|CD438497
genomic: GATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgatt ... ccttgtgcagCAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACT
EST: AGTGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATT CAATGGTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACTEST: gi|31349376|gb|CD433733.1|CD433733
genomic: AGTGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgatt ... ccttgtgcagCAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACT
EST: AGCGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATCATT CAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACTEST: gi|32807885|gb|CD960119.1|CD960119
genomic: AGTGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgatt ... ccttgtgcagCAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACT
EST: GATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATCATT CAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACT
genomic: GATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgatt ... ccttgtgcagCAATGTTTCCATGAACTTCCTGACAGGAGCCATACCATCTTCTGGTTCACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACTTGTCCAGTAATACATTGAGTGGATCTGTTCCACATTCTCTTGATAAGTTGTCCAAACTTACATTATTgtaagtgattttttatttggataaattcatctaattgttatgaaaagttgatgactcagatacaaatcatttacctgcaaccttgtgcag
- - - - - - - - - - - AGTGGA