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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATCCAAGCTGATTTTGTCAACCTGGCGAATAAGCTCCACGGCGTAAACCATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTGgtgggccgacgaagcacctgatcaaaccaactcaacctctcatcaaagtatctctgaaattcccggctaatacagttggttctctcttgatctgctgcag

Basic information

species Zea mays
transcript GRMZM2G141399_T02
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32833105|gb|CD972783.1|CD972783
EST:     ATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTG                         ATATACGCTGGCTCTGACTTCATTCTGGTCCCATCTATATTTGAGCCTTGC
genomic: ATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTGgtgggccgac ... tctgctgcagATATACGCTGGCTCTGACTTCATTCTGGTCCCATCTATATTTGAGCCTTGC
EST: gi|31354651|gb|CD439008.1|CD439008
EST:     ATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTG                         ATATACGCTGGCTCTGACTTCATTCTGGTCCCATCTATATTTGAGCCTTGC
genomic: ATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTGgtgggccgac ... tctgctgcagATATACGCTGGCTCTGACTTCATTCTGGTCCCATCTATATTTGAGCCTTGC
EST: gi|24769423|gb|CA404552.1|CA404552
EST:     ATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTG                         ATATACGCTGGCTCTGACTTCATTCTGGTCCCATCTATATTTGAGCCTTG
genomic: ATGGGCAAGTGAGGCTTTCCTTGACCTACGACGAGCCTCTCTCGCATCTGgtgggccgac ... tctgctgcagATATACGCTGGCTCTGACTTCATTCTGGTCCCATCTATATTTGAGCCTTG