1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtatgaattcttcgtcccggtttcatggtgcacatacttcgagatttaaccagcatttatgagatcgcttgctatctattttcatctgacgatggttggaaatgtttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGAAACACCCGCTTAGGATTTGCCGAGGCAGCCTAAAAGATGACCCGCTCA
species | Physcomitrella patens |
transcript | PP1S93_73V6.2 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67727802|gb|BJ978061.1|BJ978061
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCTAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37835295|gb|BJ593307.1|BJ593307
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67723608|gb|BJ973867.1|BJ973867
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67722681|gb|BJ972940.1|BJ972940
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACCTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162227600|gb|FC402307.1|FC402307
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|18335450|gb|BJ167470.1|BJ167470
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162224101|gb|FC400667.1|FC400667
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37832305|gb|BJ590317.1|BJ590317
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|18340253|gb|BJ172281.1|BJ172281
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162227601|gb|FC402308.1|FC402308
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37836344|gb|BJ594352.1|BJ594352
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162231956|gb|FC409030.1|FC409030
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|208372255|gb|DC948058.1|DC948058
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162188197|gb|FC363963.1|FC363963
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37840285|gb|BJ598293.1|BJ598293
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67573780|gb|BJ946604.1|BJ946604
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: GGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37849880|gb|BJ607888.1|BJ607888
genomic: GGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67721550|gb|BJ971809.1|BJ971809
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: TCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162174832|gb|FC351624.1|FC351624
genomic: TCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37852310|gb|BJ610318.1|BJ610318
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162187793|gb|FC364172.1|FC364172
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37831671|gb|BJ589683.1|BJ589683
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37835840|gb|BJ593852.1|BJ593852
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37825506|gb|BJ583572.1|BJ583572
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|18336621|gb|BJ168644.1|BJ168644
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67724396|gb|BJ974655.1|BJ974655
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162192779|gb|FC370137.1|FC370137
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37847368|gb|BJ605376.1|BJ605376
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|208362837|gb|DC950637.1|DC950637
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|208369244|gb|DC944561.1|DC944561
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67721362|gb|BJ971621.1|BJ971621
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGAACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162157638|gb|FC332960.1|FC332960
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162185056|gb|FC362502.1|FC362502
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162152328|gb|FC328515.1|FC328515
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162274215|gb|FC449975.1|FC449975
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37848300|gb|BJ606308.1|BJ606308
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162164607|gb|FC341902.1|FC341902
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|18335970|gb|BJ167991.1|BJ167991
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67697167|gb|BJ957400.1|BJ957400
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67693000|gb|BJ953233.1|BJ953233
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37839012|gb|BJ597020.1|BJ597020
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162153927|gb|FC329434.1|FC329434
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162254758|gb|FC431047.1|FC431047
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37828489|gb|BJ586501.1|BJ586501
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162272188|gb|FC448697.1|FC448697
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37825584|gb|BJ583650.1|BJ583650
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67691646|gb|BJ951879.1|BJ951879
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162182308|gb|FC357179.1|FC357179
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162262897|gb|FC439290.1|FC439290
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37843368|gb|BJ601376.1|BJ601376
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|18338297|gb|BJ170321.1|BJ170321
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37837367|gb|BJ595375.1|BJ595375
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37850428|gb|BJ608436.1|BJ608436
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|18340265|gb|BJ172293.1|BJ172293
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37851349|gb|BJ609357.1|BJ609357
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162170887|gb|FC346578.1|FC346578
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|67726749|gb|BJ977008.1|BJ977008
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162166828|gb|FC343005.1|FC343005
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37847348|gb|BJ605356.1|BJ605356
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|208395260|gb|DC916069.1|DC916069
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162187792|gb|FC364171.1|FC364171
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|208375136|gb|DC944861.1|DC944861
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTNTGGEST: gi|162164608|gb|FC341903.1|FC341903
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGEST: gi|37848531|gb|BJ606539.1|BJ606539
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37849743|gb|BJ607751.1|BJ607751
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|162166829|gb|FC343006.1|FC343006
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGEST: gi|37834360|gb|BJ592372.1|BJ592372
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
EST: ATCAGTGGTTTCNTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTG GATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
genomic: ATCAGTGGTTTCCTAGGACTTGATGTCCCTCCTCCAGCAGGGCCTCTGTGgtatgaattc ... tttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGG
tgagatcgcttgctatctattttcatctgacgatggttggaaatgtttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGAAACACCCGCTTAGGATTTGCCGAGGCAGCCTAAAAGATGACCCGCTCA
atctgac putative branch site (score: 3)
tgtttttttc putative PPT
aaatgtttttttca TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgaattcttcgtcccggtttcatggtgcacatacttcgagatttaaccagcatttatgagatcgcttgctatctattttcatctgacgatggttggaaatgtttttttcagGATTTTGGGAGACGTTTTCATGGGAGTATATCACACAGTTTTCGATTTTGGAAACACCCGCTTAGGATTTGCCGAGGCAGCCTAAAAGATGACCCGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG