Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACGgtgagcttgtaggttttttgctgcaggtgtcatgagttgtttgacagaggcgacattgacggtcgtgcctgctggggcaatggccaacatgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO98211
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14235410|gb|BG854226.1|BG854226
EST:     GCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACG                         GTGCCCCCTGAGGACTTTCCCTCTATGCTGGAGCGCTACGACCCTGCTAAG
genomic: GCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACGgtgagcttgt ... caacatgcagGTGCCCCCTGAGGACTTTCCCTCTATGCTGGAGCGCTACGACCCTGCTAAG
EST: gi|16432965|gb|BI998191.1|BI998191
EST:     GCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACG                         GTGCCCCCTGAGGACTTTCCCTCTATGCTGGAGCGCTACGACCCTGCTAAG
genomic: GCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACGgtgagcttgt ... caacatgcagGTGCCCCCTGAGGACTTTCCCTCTATGCTGGAGCGCTACGACCCTGCTAAG
EST: gi|15697032|gb|BI721337.1|BI721337
EST:     GCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACG                         GTGCCCCCTGAGGACTTTCCCTCTATGCTGGAGCGCTACGACCCTGCTAAG
genomic: GCATCGAGTCTGCCCGTAATGGACGTGCAGTAGACCCTGCCAGTGTTACGgtgagcttgt ... caacatgcagGTGCCCCCTGAGGACTTTCCCTCTATGCTGGAGCGCTACGACCCTGCTAAG