1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTAATAAGCACATGGGGTGTTCAAAACAATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaatattcttgataaattttatcttacccgttttatcatgtgtctttcccttttctccaataatcttcctgacttaatttccaacttctgaattt...
species | Glycine max |
transcript | GLYMA20G33060.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATATTGACTTCCTTCCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|15813546|gb|BI785821.1|BI785821
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|7924149|gb|AW830175.1|AW830175
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|22523872|gb|BU082683.1|BU082683
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|192318791|gb|FK008003.1|FK008003
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTCCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|23064484|gb|BU579257.1|BU579257
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|15663580|gb|BI700951.1|BI700951
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTATEST: gi|5820250|gb|AI988456.1|AI988456
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCTAAATTGGGTGACCTGAAGCAGACACATATTTAT
EST: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCAT GCACGTGAATTTCTCTCT
genomic: ATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaata ... cattttgcagGCACGTGAATTTCTCTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAATAAGCACATGGGGTGTTCAAAACAATATTGACTTCCTTTCATTATATACCCGGCACGTTGAAGATATTCGTCATgtaaggaatattcttgataaattttatcttacccgttttatcatgtgtctttcccttttctccaataatcttcctgacttaatttccaacttctgaattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA