1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GCAAATAATTATGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaacattgcggttgctgattctattgatctattcattttaagagaattatttattccttaatgtggagtaaaaattatgttgcatattttact...
species | Glycine max |
transcript | GLYMA17G35000.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCA AAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAAEST: gi|6069943|gb|AW099523.1|AW099523
genomic: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaa ... ttttcaacagAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAA
EST: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCA AAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAAEST: gi|6069932|gb|AW099514.1|AW099514
genomic: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaa ... ttttcaacagAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAA
EST: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCA AAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAAEST: gi|208263067|gb|GE062487.1|GE062487
genomic: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaa ... ttttcaacagAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAA
EST: TACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCA AAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAAEST: gi|27424416|gb|CA935936.1|CA935936
genomic: TACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaa ... ttttcaacagAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAA
EST: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCA AAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAA
genomic: CAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaa ... ttttcaacagAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAATAATTATGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAgtaagtccaacattgcggttgctgattctattgatctattcattttaagagaattatttattccttaatgtggagtaaaaattatgttgcatattttact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA