1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGGACATGCTTCTATGTTGGTGTGGCTGCAGTTGCAGTTGGATCTTCATTCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcatgctaacttctatttagttattgtacaaatcctttccgtttgccccctttttttgggcccattttagtttgttaacttgaattcccatactgattatcattacag
species | Glycine max |
transcript | GLYMA08G19950.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCC ATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATTEST: gi|151400699|gb|EV270513.1|EV270513
genomic: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcat ... atcattacagATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATT
EST: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCC ATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATTEST: gi|192301872|gb|FG995490.1|FG995490
genomic: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcat ... atcattacagATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATT
EST: TGTGGGATCGCTTGCCC ATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATTEST: gi|208248987|gb|GE043602.1|GE043602
genomic: TGTGGGATCGCTTGCCCgtgagttcat ... atcattacagATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATT
EST: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCC ATGACTGTCGCTTTEST: gi|298180139|gb|HO025354.1|HO025354
genomic: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcat ... atcattacagATGACTGTCGCTTT
EST: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCC ATGACTGTCGCTTTTACATCAGTCATGGCAATATTCATCATTGAGCGGATTEST: gi|298179594|gb|HO024809.1|HO024809
genomic: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcat ... atcattacagATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATT
EST: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCC ATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATT
genomic: TCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcat ... atcattacagATGACTGTCGCTTTTACATCAATCATGGCAATATTCATCATTGAGCGGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGACATGCTTCTATGTTGGTGTGGCTGCAGTTGCAGTTGGATCTTCATTCTATCATCTCAAGCCAGATGATGCTCGCCTTGTGTGGGATCGCTTGCCCgtgagttcatgctaacttctatttagttattgtacaaatcctttccgtttgccccctttttttgggcccattttagtttgttaacttgaattcccatactgattatcattacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG