Skip to another splice site:
1
5'  3'    2
5'  3'    3
5'  3'    4
5'  3'    5
5'  3'    6
5'  3'    7
5'  3'    8
5'  3'    9
5'  3'    10
5'  3'    11
5'  3'    12
5'  3'    13
5'  3'    14
5'  3'    15
5'  3'    16
5'  3'    17
5'  3'    18
5'  3'    19
5'  3'    20
5'  3'
21
5'  3'    22
5'  3'    23
5'  3'    24
5'  3'    25
5'  3'    26
5'  3'    27
5'  3'    28
5'  3'    29
5'  3'    30
5'  3'    31
5'  3'    32
5'  3'    33
5'  3'    34
5'  3'    35
5'  3'    36
5'  3'    37
5'  3'    38
5'  3'    39
5'  3'    40
5'  3'
41
5'  3'    42
5'  3'    43
5'  3'    44
5'  3'    45
5'  3'    46
5'  3'    47
5'  3'    48
5'  3'    49
5'  3'    50
5'  3'    51
5'  3'    52
5'  3'    53
5'  3'    54
5'  3'    55
5'  3'    56
5'  3'    57
5'  3'    58
5'  3'    59
5'  3'    60
5'  3'
61
5'  3'    62
5'  3'    63
5'  3'    64
5'  3'    65
5'  3'    66
5'  3'    67
5'  3'    68
5'  3'    69
5'  3'    70
5'  3'    71
5'  3'    72
5'  3'    73
5'  3'    74
5'  3'    75
5'  3'    76
5'  3'    77
5'  3'    78
5'  3'    79
5'  3'    80
5'  3'
81
5'  3'    82
5'  3'    83
5'  3'    84
5'  3'    85
5'  3'    86
5'  3'    87
5'  3'    88
5'  3'    89
5'  3'    90
5'  3'    91
5'  3'    92
5'  3'    93
5'  3'    94
5'  3'    95
5'  3'    96
5'  3'    97
5'  3'    98
5'  3'    99
5'  3'    100
5'  3'
101
5'  3'    102
5'  3'    103
5'  3'    104
5'  3'    105
5'  3'    106
5'  3'    107
5'  3'    108
5'  3'    109
5'  3'    110
5'  3'    111
5'  3'    112
5'  3'    113
5'  3'    114
5'  3'    115
5'  3'    116
5'  3'    117
5'  3'    118
5'  3'    119
5'  3'    120
5'  3'
121
5'  3'    122
5'  3'    123
5'  3'    124
5'  3'    125
5'  3'    126
5'  3'    127
5'  3'    128
5'  3'    129
5'  3'    130
5'  3'    131
5'  3'    132
5'  3'    133
5'  3'    134
5'  3'    135
5'  3'    136
5'  3'    137
5'  3'    138
5'  3'    139
5'  3'    140
5'  3'
141
5'  3'    142
5'  3'    143
5'  3'    144
5'  3'    145
5'  3'    146
5'  3'    147
5'  3'    148
5'  3'    149
5'  3'    150
5'  3'    151
5'  3'    152
5'  3'    153
5'  3'    154
5'  3'    155
5'  3'    156
5'  3'    157
5'  3'    158
5'  3'    159
5'  3'    160
5'  3'
161
5'  3'    162
5'  3'    163
5'  3'

Data associated with selected splice site

General
EST
PPT, BS, UA-tract

Sequence

atgc intronic sequence ATGC exonic sequence

gtgtggtcagacgcggtatggtgcgcggcatgcgaagttggctcctggtaggcatacgtgtgcatgcatgatgcgatgtcatgggtatcacaattatttaaacagacaattgtgcgtttggccatacgatttgcagGTGACTTCATCCCCACCTGCTCGGGCCGGCGCATCTCGTTCTCGTGGAACCCCTTCAACCGCCCCACGCCGCTGACCAACGGCCAGAACGTCAGCCTGCA

Basic information

species	Chlamydomonas reinhardtii
transcript	EDO98189
intron #	159
splice site	3'
intron type	U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments

ATGC    EST sequence
ATGC    genomic sequence (exon)
ATGC    genomic sequence (truncated intron)

EST: gi|10789382|gb|AV645111.1|AV645111

EST:     GGGCTTGCAGGCCGACGGCCTCGCCAACCGTACCTTCAGCCAGCAGACAG                         GTGACTTCATCCCCACCTGCTCGGGCCGGCGCATCTCGTTCTCGT
genomic: GGGCTTGCAGGCCGACGGCCTCGCCAACCGTACCTTCAGCCAGCAGACAGgtgtggtcag ... cgatttgcagGTGACTTCATCCCCACCTGCTCGGGCCGGCGCATCTCGTTCTCGT

atgc intronic sequence ATGC exonic sequence

Intronic sequence truncated to 55 bases.

tgggtatcacaattatttaaacagacaattgtgcgtttggccatacgatttgcagGTGACTTCATCCCCACCTGCTCGGGCCGGCGCATCTCGTTCTCGTGGAACCCCTTCAACCGCCCCACGCCGCTGACCAACGGCCAGAACGTCAGCCTGCA

     atcacaattatttaaa  TA-rich tract