1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gttagtctttttttttggcttggctcaactagttgttgtaacgtgtgttgtttttgttttcttgtttctgaagttgtaaacatgtgtttacagGGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGATTAGGAAACAGACAATATGAGCATTTTAATAAG
species | Arabidopsis thaliana |
transcript | AT4G30210.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GTGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAG GGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGAEST: gi|116435705|gb|EG478297.1|EG478297
genomic: GTGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAGgttagtcttt ... gtgtttacagGGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGA
EST: ATGGTGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAG GGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGAEST: gi|124775235|gb|EH865364.1|EH865364
genomic: ATGGTGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAGgttagtcttt ... gtgtttacagGGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGA
EST: GAGATTCTACAAATGGTTCACCGAG GGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGAEST: gi|124928347|gb|EL006001.1|EL006001
genomic: GAGATTCTACAAATGGTTCACCGAGgttagtcttt ... gtgtttacagGGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGA
EST: TGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAG GGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGAEST: gi|124860009|gb|EH944446.1|EH944446
genomic: TGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAGgttagtcttt ... gtgtttacagGGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGA
EST: TGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCAC-GAG GGGAATGACAGAGGAGA
genomic: TGAGCCTACCGACAATGCAGCGAGATTCTACAAATGGTTCACCGAGgttagtcttt ... gtgtttacagGGGAATGACAGAGGAGA
taacgtgtgttgtttttgttttcttgtttctgaagttgtaaacatgtgtttacagGGGAATGACAGAGGAGAATGGCTTAAGAACTTGAAGTATGGAGTGTTTGGATTAGGAAACAGACAATATGAGCATTTTAATAAG
ttgtaac putative branch site (score: 2)
tttttgtttt TA-rich tract