1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' | 34 5' 3' | 35 5' 3' | 36 5' 3' | 37 5' 3' | 38 5' 3' | 39 5' 3' | 40 5' 3' |
41 5' 3' | 42 5' 3' | 43 5' 3' | 44 5' 3' | 45 5' 3' | 46 5' 3' | 47 5' 3' | 48 5' 3' | 49 5' 3' | 50 5' 3' | 51 5' 3' | 52 5' 3' | 53 5' 3' | 54 5' 3' | 55 5' 3' | 56 5' 3' | 57 5' 3' | 58 5' 3' | 59 5' 3' | 60 5' 3' |
61 5' 3' | 62 5' 3' | 63 5' 3' | 64 5' 3' | 65 5' 3' | 66 5' 3' | 67 5' 3' | 68 5' 3' | 69 5' 3' | 70 5' 3' | 71 5' 3' | 72 5' 3' | 73 5' 3' | 74 5' 3' | 75 5' 3' | 76 5' 3' | 77 5' 3' | 78 5' 3' | 79 5' 3' | 80 5' 3' |
81 5' 3' | 82 5' 3' | 83 5' 3' | 84 5' 3' | 85 5' 3' | 86 5' 3' | 87 5' 3' | 88 5' 3' | 89 5' 3' | 90 5' 3' | 91 5' 3' | 92 5' 3' | 93 5' 3' | 94 5' 3' | 95 5' 3' | 96 5' 3' | 97 5' 3' | 98 5' 3' | 99 5' 3' | 100 5' 3' |
101 5' 3' | 102 5' 3' | 103 5' 3' | 104 5' 3' | 105 5' 3' | 106 5' 3' | 107 5' 3' | 108 5' 3' | 109 5' 3' | 110 5' 3' | 111 5' 3' | 112 5' 3' | 113 5' 3' | 114 5' 3' | 115 5' 3' | 116 5' 3' | 117 5' 3' | 118 5' 3' | 119 5' 3' | 120 5' 3' |
121 5' 3' | 122 5' 3' | 123 5' 3' | 124 5' 3' | 125 5' 3' | 126 5' 3' | 127 5' 3' | 128 5' 3' | 129 5' 3' | 130 5' 3' | 131 5' 3' | 132 5' 3' | 133 5' 3' | 134 5' 3' | 135 5' 3' | 136 5' 3' | 137 5' 3' | 138 5' 3' | 139 5' 3' | 140 5' 3' |
141 5' 3' | 142 5' 3' | 143 5' 3' | 144 5' 3' | 145 5' 3' | 146 5' 3' | 147 5' 3' | 148 5' 3' | 149 5' 3' | 150 5' 3' | 151 5' 3' | 152 5' 3' | 153 5' 3' | 154 5' 3' | 155 5' 3' | 156 5' 3' | 157 5' 3' | 158 5' 3' | 159 5' 3' | 160 5' 3' |
161 5' 3' | 162 5' 3' | 163 5' 3' |
GCGCGCAGCTGCGGTCCCTGGCGCCCGCCGCCCAGACGCTGCAGGGCACCGCCCACTTCCAGCTCTTCACCCGGCTCATGGACTGGCCCGCTGCAGAGATgtgcgtgggtgcctgggtggctgtatgtccggttggcccgctcaaaataacgtcgagtacatgaataacgctggctgctgctcgcccgccgttcatatacag
species | Chlamydomonas reinhardtii |
transcript | EDO98189 |
intron # | 74 |
splice site | 5' |
intron type | U2 |
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGCGCAGCTGCGGTCCCTGGCGCCCGCCGCCCAGACGCTGCAGGGCACCGCCCACTTCCAGCTCTTCACCCGGCTCATGGACTGGCCCGCTGCAGAGATgtgcgtgggtgcctgggtggctgtatgtccggttggcccgctcaaaataacgtcgagtacatgaataacgctggctgctgctcgcccgccgttcatatacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG