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TCACAATTCAACACTCAAAAGTAACAAAATCATCATAATCTCAGgtgggttgggttgaaactttgcttttgatgagtaaataatcattttgtgaggaaattttacagtgagtccgagattctgagtaggcgatttgggtgttct...
species | Vitis vinifera |
transcript | Vv13s0084g00660.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCAACACTCAAAAGTAACAAAATCATCATAATCTCAG GTTTTTCTTCTGGGTTTAGGGTTTTCTGAGGAACCAAGGAGGTGATGATGGEST: gi|161709933|gb|FC058067.1|FC058067
genomic: TCAACACTCAAAAGTAACAAAATCATCATAATCTCAGgtgggttggg ... ttttccctagGTTTTTCTTCTGGGTTTAGGGTTTTCTGAGGAACCAAGGAGGTGATGATGG
EST: ACACTCAAAAGTAACAAAATCATCATAATCTCAG GTTTTTCTTCTGGGTTTAGGGTTTTCTGAGGAACCAAGGAGGTGATGATGG
genomic: ACACTCAAAAGTAACAAAATCATCATAATCTCAGgtgggttggg ... ttttccctagGTTTTTCTTCTGGGTTTAGGGTTTTCTGAGGAACCAAGGAGGTGATGATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCACAATTCAACACTCAAAAGTAACAAAATCATCATAATCTCAGgtgggttgggttgaaactttgcttttgatgagtaaataatcattttgtgaggaaattttacagtgagtccgagattctgagtaggcgatttgggtgttct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagtaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aggaaat