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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTGCTGATATTAAAGCTAATACCCCTGGAATTGAAAATGTTATTATTTCCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAGgtatggttaaaattgtgttttacttcttaaatcatgcaggcagtgagagtggattctgagtttgtgtgctcttggatgctttcag

Basic information

species Glycine max
transcript GLYMA20G38950.3
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208304891|gb|GE102732.1|GE102732
EST:     CCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAG                         GGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGT
genomic: CCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAGgtatggttaa ... atgctttcagGGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGT
EST: gi|24135368|gb|BU925887.1|BU925887
EST:     CCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAG                         GGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGT
genomic: CCACCCACTGCCAGAATGATCTCGGACTTTCTACTGCAAACACTATAGAGgtatggttaa ... atgctttcagGGTGCGCGTGCTGGTGCAAGGCAACTGGAAGTGACGATTAATGGGATTGGT