1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGTCAAACTTTTGAGTAGTGATGGTAGCACACATGTTGCTTGTTCTGTTGGTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagttgtatatattcgtttttgcttgttaggttaggggattttaatacattacatcatattgacgatattattggtttattattgccagctgtgt...
species | Glycine max |
transcript | GLYMA20G38950.3 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCEST: gi|192298527|gb|FG988498.1|FG988498
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCEST: gi|192305633|gb|FG994343.1|FG994343
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCEST: gi|207733383|gb|GD713223.1|GD713223
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCEST: gi|4313425|gb|AI460544.1|AI460544
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCEST: gi|19053418|gb|BM732085.1|BM732085
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATCEST: gi|208097892|gb|GD893445.1|GD893445
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
EST: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAG GAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
genomic: GTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagtt ... ttttttgcagGAGCCAGTAACACTTCTTGAGTACTCAATGAATGCAGTCACGGAAGGCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTCAAACTTTTGAGTAGTGATGGTAGCACACATGTTGCTTGTTCTGTTGGTACAGGACCAGTGGATTCGGCATACAAGGCTGTGGATCTGATTGTGAAGgtttgaagttgtatatattcgtttttgcttgttaggttaggggattttaatacattacatcatattgacgatattattggtttattattgccagctgtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA