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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCGCTCAATAACTGGGGACTTGCTCTTCAGgtatatttaactcgccagtattcaagcatttcacttctatacactaactacaattaaaaggaaaagtgtatttttatggttacatgcttctaactgcatg...

Basic information

species Glycine max
transcript GLYMA20G35990.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298173874|gb|HO017210.1|HO017210
EST:     GCTCAATAACTGGGGACTTGCTCTTCAG                         GAACTCAGTGGCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACT
genomic: GCTCAATAACTGGGGACTTGCTCTTCAGgtatatttaa ... tccaatttagGAACTCAGTGGCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACT
EST: gi|254324005|gb|GR836237.1|GR836237
EST:     GCGCTCAATAACTGGGGACTTGCTCTTCAG                         GAACTCAGTGGCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACT
genomic: GCGCTCAATAACTGGGGACTTGCTCTTCAGgtatatttaa ... tccaatttagGAACTCAGTGGCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACT
EST: gi|15814226|gb|BI786501.1|BI786501
EST:     GCGCTCAATAACTGGGGACTTGCTCTTCAG                         GAACTCAGTGGCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACT
genomic: GCGCTCAATAACTGGGGACTTGCTCTTCAGgtatatttaa ... tccaatttagGAACTCAGTGGCATTGTTCCAGCTCGAGAAAAGCAAAAGATTGTGAGAACT