1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtgagcactgcttattttcttctctgtttggtttggtactcttacaaacgatttctgttgtcctaatgcattacactttgaaggttttctgatttctcaatctgacgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGACTTCAGATGTTTGTGGACAATGTG
species | Glycine max |
transcript | GLYMA20G03330.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCAT GCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGAEST: gi|298172645|gb|HO019685.1|HO019685
genomic: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCATgtgagcactg ... acgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGA
EST: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCAT GCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGAEST: gi|6482215|gb|AW201486.1|AW201486
genomic: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCATgtgagcactg ... acgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGA
EST: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCAT GCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGAEST: gi|21887828|gb|BQ741041.1|BQ741041
genomic: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCATgtgagcactg ... acgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGA
EST: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCAT GCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGAEST: gi|22524022|gb|BU082833.1|BU082833
genomic: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCATgtgagcactg ... acgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGA
EST: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCAT GCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGA
genomic: TGAGAAGATTGCAACAAATACTTGGTCGGAAGCACCAGCGCAACCTGCATgtgagcactg ... acgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgagcactgcttattttcttctctgtttggtttggtactcttacaaacgatttctgttgtcctaatgcattacactttgaaggttttctgatttctcaatctgacgtgtgtagGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCGGCAGTATTTGGACTTCAGATGTTTGTGGACAATGTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG