1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCATgtacaaaatatagctcttcattttaaatatgattttacattactcttaaaattttggtaacaagaaaatatgcttatagttatgtgattcttgtgctacag
species | Glycine max |
transcript | GLYMA20G03210.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCAT AATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAGEST: gi|15204564|gb|BI427332.1|BI427332
genomic: CCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCATgtacaaaata ... tgtgctacagAATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAG
EST: CGCTTCAATCAT AATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAGEST: gi|11689544|gb|BF597220.1|BF597220
genomic: CGCTTCAATCATgtacaaaata ... tgtgctacagAATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAG
EST: CCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCAT AATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAGEST: gi|254326998|gb|GR836607.1|GR836607
genomic: CCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCATgtacaaaata ... tgtgctacagAATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAG
EST: CCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCAT AATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAG
genomic: CCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCATgtacaaaata ... tgtgctacagAATGGACTTTGCAACTTATGCTGAGACATGCTTTCAGAAATTTGGGGATAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGGAAAACAAGTACAGTGGATGGCTAAACGCTTCAATCATgtacaaaatatagctcttcattttaaatatgattttacattactcttaaaattttggtaacaagaaaatatgcttatagttatgtgattcttgtgctacag
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