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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGGATATGGCCAAATCAATCAGGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAGgtaactctcattatccttgtgcaattgttacatttctgtaatttagttttgaatatataataaaagttgcattccatcaacaaatgttgtctacatcttgagagttctgagttatagtaacatttctgatttcttgatccctacatttgtag

Basic information

species Glycine max
transcript GLYMA20G03210.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254348672|gb|GR852351.1|GR852351
EST:     GGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAG                         GAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGG
genomic: GGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAGgtaactctca ... acatttgtagGAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGG
EST: gi|11689544|gb|BF597220.1|BF597220
EST:     GGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAG                         GAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGG
genomic: GGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAGgtaactctca ... acatttgtagGAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGG
EST: gi|254326998|gb|GR836607.1|GR836607
EST:     GGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAG                         GAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGG
genomic: GGCAGGAGTTGATCATTATAATAAACTCATCAACGCGTTACTAGCCAAAGgtaactctca ... acatttgtagGAATTGAACCATATGTGACTCTCTATCACTGGGACCTGCCTCAAGCCTTGG