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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGGAGgtaattttgaatctttattctaatgattgaatagctattctgctttgtaatttttatgttacggtttttcaatatgtggtattgttaccgtttttcaatgtgtggtatttcag

Basic information

species Glycine max
transcript GLYMA19G36220.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10233651|gb|BE802539.1|BE802539
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|13252330|gb|BG363233.1|BG363233
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|120491608|gb|EH219775.1|EH219775
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|19271302|gb|BM887558.1|BM887558
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|298195924|gb|HO044315.1|HO044315
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|19347223|gb|BM892103.1|BM892103
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|120491468|gb|EH219635.1|EH219635
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|7639292|gb|AW733618.1|AW733618
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|10234684|gb|BE803572.1|BE803572
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG
EST: gi|6913697|gb|AW395227.1|AW395227
EST:     ACTAGATACAGAGAGATGGAG
genomic: ACTAGATACAGAGAGATGGAG