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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAGTCTAGATCTCAATCGTCTCCACCTTGCTTTCTTCTCCAGCGTCCGATTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttcttaacatttccctaaacataactcacacacccctcttctctagggtttcaatttcaccatgtttccctttctcaaattag

Basic information

species Glycine max
transcript GLYMA19G36220.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13252330|gb|BG363233.1|BG363233
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|298196320|gb|HO044711.1|HO044711
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|120491608|gb|EH219775.1|EH219775
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|298195924|gb|HO044315.1|HO044315
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGTCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|298164637|gb|HO014282.1|HO014282
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGTATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|19347223|gb|BM892103.1|BM892103
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|7639292|gb|AW733618.1|AW733618
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|298174377|gb|HO017713.1|HO017713
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
EST: gi|6913697|gb|AW395227.1|AW395227
EST:     TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAG                         GGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA
genomic: TTCTCTCACCGATCTCGCGCCAAATACAAATTCGTTACAACCCTACCCAGgtatcttctt ... ctcaaattagGGTTCCGGCGAGCATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCA