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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAGCAGCAGGTGAAGCCATTGCTCATCATGTGAGGGGTCACTACCATCATCCTTTAGATGCAATACAGAGTTTAAATGCAGACAGAgtaaatcttttatatacttctaattaaatgagattatcctattcattattttagcttgaatgtaagatttaaatattgcccagccctaacccttcgttcatccccctttttctcgttgttcatcctttccttcaaacag

Basic information

species Glycine max
transcript GLYMA19G17460.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193309960|gb|FK277944.1|FK277944
EST:     GTCACTACCATCATCCTTTAGATGCAATACAGAGTTTAAATGCAGACAGA                         ATGGTAGACAAGCCTCCAGCATTTTCTTCTTTCAGGGAACGCCTTCATCAT
genomic: GTCACTACCATCATCCTTTAGATGCAATACAGAGTTTAAATGCAGACAGAgtaaatcttt ... cttcaaacagATGGTAGACAAGCCTCCAGCATTTTCTTCTTTCAGGGAACGCCTTCATCAT
EST: gi|9204647|gb|BE330871.1|BE330871
EST:     GTCACTACCATCATCCTTTAGATGCAATACAGAGTTTAAATGCAGACAGA                         ATGGTAGACAAGCCTCCAGCATTTTCTTCTTTCACGGAACGCCTTCATCAT
genomic: GTCACTACCATCATCCTTTAGATGCAATACAGAGTTTAAATGCAGACAGAgtaaatcttt ... cttcaaacagATGGTAGACAAGCCTCCAGCATTTTCTTCTTTCAGGGAACGCCTTCATCAT