1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTTGAAGAAAAACTGGATGGTGGACAAGGGAAAACTTCAGTTCGGCGCTTCTTTTCAAGATTCTGTACACCAATATTTTTGGAGgcaagtacaacttttgcatcatttatttgaaataaccacatttgcactacatgtaatattatcttttcttttttatgcag
species | Glycine max |
transcript | GLYMA18G47670.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTTCAGTTCGGCGCTTCTTTTCAAGATTCTGTACACCAATATTTTTGGAG TCTTTTATTTTAACATTEST: gi|208194571|gb|GD988106.1|GD988106
genomic: CTTCAGTTCGGCGCTTCTTTTCAAGATTCTGTACACCAATATTTTTGGAGgcaagtacaa ... ttttatgcagTCTTTTATTTTAACATT
EST: ACCAATATTTTTGGAG TCTTTTATTTTAACATTCCTTGCTGAGTGGGGTGACCGTAGCCAGATAGCG
genomic: ACCAATATTTTTGGAGgcaagtacaa ... ttttatgcagTCTTTTATTTTAACATTCCTTGCTGAGTGGGGTGATCGTAGCCAGATAGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGAAGAAAAACTGGATGGTGGACAAGGGAAAACTTCAGTTCGGCGCTTCTTTTCAAGATTCTGTACACCAATATTTTTGGAGgcaagtacaacttttgcatcatttatttgaaataaccacatttgcactacatgtaatattatcttttcttttttatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG