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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATAGAGAATGATTCGATCCTTTCTCTTGGCTTGGACTCCACTGGTCCTGGACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaacgaagctgcgatgtgttcacattcattgctagcttttaactatctatttatagctagtgtgttatctagcattatccattttggatctca...

Basic information

species Glycine max
transcript GLYMA18G47670.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192325593|gb|FK019449.1|FK019449
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
EST: gi|19935787|gb|BQ080586.1|BQ080586
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAG
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAG
EST: gi|19935946|gb|BQ080653.1|BQ080653
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCT
EST: gi|209709461|gb|BW668377.1|BW668377
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
EST: gi|19934369|gb|BQ079399.1|BQ079399
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
EST: gi|213605011|gb|DB956358.1|DB956358
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
EST: gi|193437896|gb|FK403567.1|FK403567
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT
EST: gi|254344439|gb|GR851136.1|GR851136
EST:     GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAG                         ATTGGGGATGAGACGTTTATAATAGCAGCTCT-ATGGCTATGCGTCACCCT
genomic: GACTCTTCGACGCATTTTTCGCGAGTTTTTCGATGATCCTTGTCAGTGAGgttagtttaa ... tttatgctagATTGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCACCCT