1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTACTTTCTACAGGGCTTGGCAGGATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAGgtacaatttctgggtttgatacttatttctgagcagatttacatattataatttgtgaattttgcaaaaaagcaggttaaaaagtaattattttgaatta...
species | Glycine max |
transcript | GLYMA18G47670.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCATEST: gi|208289098|gb|GE088051.1|GE088051
genomic: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
EST: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCATEST: gi|254344439|gb|GR851136.1|GR851136
genomic: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
EST: GATTGTGCCAAATTTGATTTCTAGGA-GCATACGAATAGTGCTGCTACAG T-CTTTATGCTTTCTTTGGGTTAAGGTEST: gi|207848713|gb|GD820214.1|GD820214
genomic: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGT
EST: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
genomic: GATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACTTTCTACAGGGCTTGGCAGGATTGTGCCAAATTTGATTTCTAGGAAGCATACGAATAGTGCTGCTACAGgtacaatttctgggtttgatacttatttctgagcagatttacatattataatttgtgaattttgcaaaaaagcaggttaaaaagtaattattttgaatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagtaa