1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
ATGATCTGGAACCACTTGAAGAGTCAAAGCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttatttgtctgttagtattttggtatgaatttcgattactgcaagttactagtactatcagtattaataattttcagtgtcttattgaaagtta...
species | Glycine max |
transcript | GLYMA18G47590.1 |
intron # | 20 |
splice site | 5' |
intron type | U2 |
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGAEST: gi|51341246|gb|CO982563.1|CO982563
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGAEST: gi|213593591|gb|DB977423.1|DB977423
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGAEST: gi|254342249|gb|GR853386.1|GR853386
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGAEST: gi|193583524|gb|FK539256.1|FK539256
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAA-GTACACCAAAATTGAACAAGGATGAGGATGAEST: gi|27446280|gb|CA953403.1|CA953403
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGAEST: gi|51336221|gb|CO980087.1|CO980087
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
EST: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGC CTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
genomic: GCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttat ... tatttttagcCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGATCTGGAACCACTTGAAGAGTCAAAGCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGGtatgttttatttgtctgttagtattttggtatgaatttcgattactgcaagttactagtactatcagtattaataattttcagtgtcttattgaaagtta
- - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA