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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCGATCAACAAATCCCTCCACCACTAGTTCTGAAGCAACTGCTGGTTCTCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAAgtaagttctgatactaaatttttcttctcagaatcctgtgactaagtgagtcttttcagcagttgtttttcaaaagcatttttccttatgctgatatttt...

Basic information

species Glycine max
transcript GLYMA16G22530.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16349202|gb|BI974797.1|BI974797
EST:     TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAA                         CTGGAGGTGCTCAAAATAACCCCAGAAGGT
genomic: TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAAgtaagttctg ... gtatttgtagCTGGAGGTGCTCAAAATAACCCCAGAAGGT
EST: gi|193440352|gb|FK410447.1|FK410447
EST:     TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGATCCTCTACGGGAA                         CTGGAGGTGCTCAAAATAACCCCAGAAGGTCGTTGACTACTGGTGTGGATG
genomic: TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAAgtaagttctg ... gtatttgtagCTGGAGGTGCTCAAAATAACCCCAGAAGGTCGTTGACTACTGGTGTGGATG
EST: gi|254336879|gb|GR843058.1|GR843058
EST:     AATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAA                         CTGGAGGTGCTCAAAATAACCCCAGAAGGTCGTTGACTACTGGTGTGGATG
genomic: AATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAAgtaagttctg ... gtatttgtagCTGGAGGTGCTCAAAATAACCCCAGAAGGTCGTTGACTACTGGTGTGGATG
EST: gi|18041069|gb|BM309363.1|BM309363
EST:     TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAA                         CTGGAGGTGCTCAAAATAACCCCAGAAGGTCGTTGACTACTGGTGTGGATG
genomic: TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAAgtaagttctg ... gtatttgtagCTGGAGGTGCTCAAAATAACCCCAGAAGGTCGTTGACTACTGGTGTGGATG
EST: gi|13563218|gb|BG551438.1|BG551438
EST:     TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAA                         CTGGAGGTGCTCAAAATAACC
genomic: TCCCTTACCCAATACTAACCCGCTTCCAAATCCTTGGTCCTCTACGGGAAgtaagttctg ... gtatttgtagCTGGAGGTGCTCAAAATAACC