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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGGATCAGTTGCCGTATTTGTATTAAGGCACAAAGACCTTGTGGGAGGTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATGgtaagtgtcttcattccttgtgttagcagaactgaaagctttctagtgtctccaaactataggagatttagacagttctcaggtgaatgatgttatttct...

Basic information

species Glycine max
transcript GLYMA08G19760.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9900560|gb|BE609528.1|BE609528
EST:     GTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATG                         GTTATTGGGCTATTATCCACTGGGATTGACAACTGGGGACATTTAGGA
genomic: GTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATGgtaagtgtct ... tctcgtgcagGTTATTGGGCTATTATCCACTGGGATTGACAACTGGGGACATTTAGGA
EST: gi|58020307|gb|CX707049.1|CX707049
EST:     GTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATG                         GTTATTGGGCTATTATCCACTGGGATTGACAACTGGGGACAT
genomic: GTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATGgtaagtgtct ... tctcgtgcagGTTATTGGGCTATTATCCACTGGGATTGACAACTGGGGACAT
EST: gi|58016763|gb|CX703505.1|CX703505
EST:     GTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATG                         GTTATTGGGCTATTATCCACTGGGATTGACAACTGGGGACAT
genomic: GTGGTAAAAAAGATTTACAACACATAGCCCAAGTAATTGCCCTCAATATGgtaagtgtct ... tctcgtgcagGTTATTGGGCTATTATCCACTGGGATTGACAACTGGGGACAT