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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCATCGCCACCGCCGCGTCCCTCCACTTCGGCCACCTTCTCCGCCGCCGCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAGgtcccttttcaattttcatttgtctattccacttaattgcaaaatttggaacttaggtttggttcacattttcaagttatttttcttttcctcatttatc...

Basic information

species Glycine max
transcript GLYMA08G19760.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|20075473|gb|BQ094256.1|BQ094256
EST:     GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAG                         AAACTCGCTCCTTTAACTCACATTTTTAGATTGAACGATAAGTGGTGTCAA
genomic: GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAGgtcccttttc ... tgctgaacagAAACTCGCTCCTTTAACTCACATTTTTAGATTGAACGATAAGTGGTGTCAA
EST: gi|208079414|gb|GD877590.1|GD877590
EST:     GCGCGACCCACCATCTCCGACTTGGGGTTCTTCTTCACTCCTGTTTCAAG                         AAACTCGCTCCTTTAACTCACATTTTTAGATT
genomic: GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAGgtcccttttc ... tgctgaacagAAACTCGCTCCTTTAACTCACATTTTTAGATT
EST: gi|151406516|gb|EV276331.1|EV276331
EST:     GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAG                         AAACTCGCTCCTTTAACTCACATTTTTAGATTGAACGATAAGTGGTGTCAA
genomic: GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAGgtcccttttc ... tgctgaacagAAACTCGCTCCTTTAACTCACATTTTTAGATTGAACGATAAGTGGTGTCAA
EST: gi|207763253|gb|GD735206.1|GD735206
EST:     GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAG                         AAACTCGCTCCTTTAACTCACATTTTTAG
genomic: GCGCGACCCACCATCTCCGCCTTGGGGTTCTTCTTCACTCCTGTTTCAAGgtcccttttc ... tgctgaacagAAACTCGCTCCTTTAACTCACATTTTTAG