1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
TGATCACTTCCGGTTTTTCTCAAACATGATAAAGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatattttttgcttcacattttaataaataatataatatggtaaacatcgctatatttttattaaaacagacatacacagatacactgccatttatgcttatgcaacagtttttactttgcag
species | Glycine max |
transcript | GLYMA06G10540.1 |
intron # | 18 |
splice site | 5' |
intron type | U2 |
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAACAAATTTEST: gi|208148902|gb|GD949356.1|GD949356
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAACAAATTTEST: gi|208298702|gb|GE095051.1|GE095051
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAACAAATTTEST: gi|193509752|gb|FK470758.1|FK470758
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTTEST: gi|208061591|gb|GD857163.1|GD857163
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTTEST: gi|208208486|gb|GE008477.1|GE008477
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: CATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTTEST: gi|193728840|gb|FK663786.1|FK663786
genomic: CATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTTEST: gi|193732865|gb|FK668194.1|FK668194
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
EST: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAG AACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
genomic: AGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatatttt ... tactttgcagAACGACATAACATGGCATGAAGACAATTGGGACAATCATGACAGCAAATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATCACTTCCGGTTTTTCTCAAACATGATAAAGTACAGGCATGCACATGAAGTATTCAATCATGAAAGTTTTCTCAGCAAGgtaatattttttgcttcacattttaataaataatataatatggtaaacatcgctatatttttattaaaacagacatacacagatacactgccatttatgcttatgcaacagtttttactttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG