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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttcagctcgtctattttactataactttcaacatttcgcttatcatttgtctttctcttattcttttcccctctaatgaaatctttttttttggtctcagTGGTATGGACTTGTTCGCTTGTGATTCTATGTTGAATTCACTACGTTTGGTGGAAACCAAAAAGGCGAATGTGAATTGGTACATCTATACACATGAAACT

Basic information

species Arabidopsis thaliana
transcript AT3G12010.1
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgtctttctcttattcttttcccctctaatgaaatctttttttttggtctcagTGGTATGGACTTGTTCGCTTGTGATTCTATGTTGAATTCACTACGTTTGGTGGAAACCAAAAAGGCGAATGTGAATTGGTACATCTATACACATGAAACT
                         ctctaat  putative branch site (score: 3)
                                    tctttttttttggtct  putative PPT
                          tctaatgaaatctttt  TA-rich tract