1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaagctcactgtaggttctacatatttatggacatcttgtttgaaaattctcatattcttatattgtaatggtttattagcttagatatgaatattcaaaaaggaagtctattttttcttttctgttctcaagctttctctaaacgttttccttgcggcgcagATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAACAACGGTTGGCTAAGTCATCTCTCGCTTTCAATTGTAAAAC
species | Arabidopsis thaliana |
transcript | AT1G17280.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TCTCATTTATG ATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAAEST: gi|86056972|gb|DR352729.1|DR352729
genomic: TCTCATTTATGgtaagctcac ... tgcggcgcagATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAA
EST: CATACTTACAGGACTTCTCTCATTTATG ATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAAEST: gi|164223890|gb|ES033780.1|ES033780
genomic: CATACTTACAGGACTTCTCTCATTTATGgtaagctcac ... tgcggcgcagATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAA
EST: CATACTTACAGGACTTCTCTCATTTATG ATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAAEST: gi|116477746|gb|EG520338.1|EG520338
genomic: CATACTTACAGGACTTCTCTCATTTATGgtaagctcac ... tgcggcgcagATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAA
EST: CATACTTACAGGACTTCTCTCATTTATG GTGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAA
genomic: CATACTTACAGGACTTCTCTCATTTATGgtaagctcac ... tgcggcgcagATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAA
ctattttttcttttctgttctcaagctttctctaaacgttttccttgcggcgcagATGGATACCAGTCCGACAACTGGAAGTGTTAACACTACTGTAATTGAGAAACAACGGTTGGCTAAGTCATCTCTCGCTTTCAATTGTAAAAC
ctctaaa putative branch site (score: 3)
cgttttcctt CT-rich tract
ttttctttt TA-rich tract