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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAATACTGAGCAGCGTGGCATGCCGGATTTAAATTCTCTTAGAGAAGTAATGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatatttaaagttctatatctgttgatgaatttcaatgaatatcggttgccacagatgtttacttatagtttcctttgatgaattctagtgttct...

Basic information

species Glycine max
transcript GLYMA16G22530.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193624234|gb|FK574254.1|FK574254
EST:     AATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: AATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|23052390|gb|BU577147.1|BU577147
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|254336879|gb|GR843058.1|GR843058
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|193561485|gb|FK518996.1|FK518996
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|208049106|gb|GD845447.1|GD845447
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACATTGCAG                         CAACTCTTGTCTTTCCAGCAAACTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|207809958|gb|GD781934.1|GD781934
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|6666552|gb|AW278003.1|AW278003
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
EST: gi|4313901|gb|AI461020.1|AI461020
EST:     TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAG                         CAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA
genomic: TGCAAAATCCAGAATTCCTTCGTTTGTTTTCTTCACCTGAGACGTTGCAGgtacacatat ... acaatttcagCAACTCTTGTCTTTCCAGCAAGCTCTTATGTCTCAGCTTGGCCAGCAACAA