1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...gtacctttgtagcattatttattcatctatattgcttatcatttaaatgtgcatttttttcttcatgaaactgattttattgttattatacactatacagGTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTACAAACAGCTAAACACCATACTTCTCAGTATTCTGGTTTTTCTG
species | Zea mays |
transcript | GRMZM5G840435_T02 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGT--TT-- ----CCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTAEST: gi|76013124|gb|DT940294.1|DT940294
genomic: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGTGCTTTGgttcgtacta ... cactatacagGTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTA
EST: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGT--TT-- ----CCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTAEST: gi|71313594|gb|DR793373.1|DR793373
genomic: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGTGCTTTGgttcgtacta ... cactatacagGTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTA
EST: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGTGCTTTG GTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTAEST: gi|31406342|gb|CD485074.1|CD485074
genomic: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGTGCTTTGgttcgtacta ... cactatacagGTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTA
EST: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGT--TT-- ----CCTTGGTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTA
genomic: AGCTTCATCCAGTCCATCATCTCATCTCAGCTGCAGAAGCAGGTGCTTTGgttcgtacta ... cactatacagGTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTA
aatgtgcatttttttcttcatgaaactgattttattgttattatacactatacagGTTTCCTTGTTTACAAATCCCATATGGCTGGTGAAAACAAGACTGCAACTACAAACAGCTAAACACCATACTTCTCAGTATTCTGGTTTTTCTG
aactgat putative branch site (score: 27)
attttattgttattat TA-rich tract