1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATTGAAGCTGGTCTGCTGCAAAAAGAATATGTGGCCAAGGTTGTTGGGGTTTTTCCTGATGGTGAGgtatgccgtttatgcagtgcccatatttctccggctccaaggataaatgactattctgttgtgaaaataaatagtaccgaaaatctgtaacatgtctgat...
species | Zea mays |
transcript | GRMZM2G147335_T03 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGCAAAAAGAATATGTGGCCAAGGTTGTTGGGGTTTTTTCTGATGGTGAG CAAACCGTCGATGCAAATGTAAATTTCAACGCACGGEST: gi|78092631|gb|DV521005.1|DV521005
genomic: TGCAAAAAGAATATGTGGCCAAGGTTGTTGGGGTTTTTCCTGATGGTGAGgtatgccgtt ... ttcttttcagCAAACCGTCGATGCCAATGTAAATTTCAACGCACGG
EST: GGGTTTTTCCTGATGGTGAG CAAACCGTCGATGCCAATGTAAATTTCAACGCACGGGAAGGAAGGAGTACCEST: gi|78092632|gb|DV521006.1|DV521006
genomic: GGGTTTTTCCTGATGGTGAGgtatgccgtt ... ttcttttcagCAAACCGTCGATGCCAATGTAAATTTCAACGCACGGGAAGGAAGGAGTACC
EST: TGCAAAAAGAATATGTGGCCAAGGTTGTTGGGGTTTTTCCTGATGGTGAG CAAACCGTCGATGCCAATGTAAATTTCAACGCACGGGAAGGAAGGAGTACC
genomic: TGCAAAAAGAATATGTGGCCAAGGTTGTTGGGGTTTTTCCTGATGGTGAGgtatgccgtt ... ttcttttcagCAAACCGTCGATGCCAATGTAAATTTCAACGCACGGGAAGGAAGGAGTACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGAAGCTGGTCTGCTGCAAAAAGAATATGTGGCCAAGGTTGTTGGGGTTTTTCCTGATGGTGAGgtatgccgtttatgcagtgcccatatttctccggctccaaggataaatgactattctgttgtgaaaataaatagtaccgaaaatctgtaacatgtctgat
- - - - - - - - - - AAAGAA