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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTAATCCGGACTACAAAGGCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAGgtaccttgccgagtctttcagctacagctcgcctgtgattggacatattgggtggcgttaattaacctgctccaatttctgttag

Basic information

species Zea mays
transcript GRMZM2G010044_T02
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71772889|gb|DR970812.1|DR970812
EST:     GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAG                         GTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG
genomic: GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAGgtaccttgcc ... tttctgttagGTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG
EST: gi|76012112|gb|DT939282.1|DT939282
EST:     GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAG                         GTTCTCTTGGGCACTGATTCTCATACATGCCATGCTGGAGCTTTTGGTCAG
genomic: GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAGgtaccttgcc ... tttctgttagGTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG
EST: gi|31355882|gb|CD440239.1|CD440239
EST:     GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAG                         GTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG
genomic: GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAGgtaccttgcc ... tttctgttagGTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG
EST: gi|31354069|gb|CD438426.1|CD438426
EST:     GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAG                         GTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG
genomic: GCGTCTGCCACATCGCACTTGCTCAGGAAGGCCACTGCCGACCAGGCGAGgtaccttgcc ... tttctgttagGTTCTCTTGGGCACTGATTCTCATACATGCAATGCTGGAGCTTTTGGTCAG