1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...tctgatataggtatccaaactattccaacgtgcagctgatatggacttatttcaaatagactgatgtgcgagtttcatgagtgctgatatggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAGTTCATTCATATGCCATTGTGACCCGAGATTCTGCCTTTTACTATGTGA
species | Physcomitrella patens |
transcript | PP1S96_73V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAG GTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAEST: gi|100373869|gb|BY967833.1|BY967833
genomic: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAGgtaggtttat ... ggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
EST: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAG GTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAEST: gi|162249092|gb|FC420369.1|FC420369
genomic: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAGgtaggtttat ... ggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
EST: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAG GTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAEST: gi|162255110|gb|FC430725.1|FC430725
genomic: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAGgtaggtttat ... ggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
EST: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAG GTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAEST: gi|162153522|gb|FC330123.1|FC330123
genomic: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAGgtaggtttat ... ggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
EST: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAG GTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAEST: gi|162167144|gb|FC343620.1|FC343620
genomic: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAGgtaggtttat ... ggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
EST: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAG GTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
genomic: AGCTGGTCCAGGAGAAGGCTTATGCTTTTGTCGTGACTACCCTTGATGAGgtaggtttat ... ggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTA
cttatttcaaatagactgatgtgcgagtttcatgagtgctgatatggacgtgcagGTTGCGTGGCTTTACAATCTGCGGGGAGGAGACGTGCTCTACAACCCTGTAGTTCATTCATATGCCATTGTGACCCGAGATTCTGCCTTTTACTATGTGA
tgctgat putative branch site (score: 16)
ttcaaata TA-rich tract