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CGTAGGAGGAAATGCAGCCATTATCCACTATGCAGCCAAGAAAGAGACTTGTGCTGAGATGCAACCTGATTCCATGTATTTGTGTGACTCAGGCGGTCAGgtgaggctcgctctagtttagcttcttgattgttcgggttcagatagtgatactttgttttgcacatagctgttgattttgtgctttagttacatgtgct...
species | Physcomitrella patens |
transcript | PP1S96_73V6.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CAGGCGGTCAG TACCTTGATGGAACCACTGACGTTACGAGAACTATGCACTTCGGAAAACCAEST: gi|100440020|gb|BY980355.1|BY980355
genomic: CAGGCGGTCAGgtgaggctcg ... ggttgtgaagTACCTTGATGGAACCACTGACGTTACGAGAACTATGCACTTCGGAAAACCA
EST: GTGCTGAGATGCAACCTGATTCCATGTATTTGTGTGACTCAGGCGGTCAG TACCTTGATGGAACCACTGACGTTACGAGAACTATGCACTTCGGAAAACCAEST: gi|162175424|gb|FC350907.1|FC350907
genomic: GTGCTGAGATGCAACCTGATTCCATGTATTTGTGTGACTCAGGCGGTCAGgtgaggctcg ... ggttgtgaagTACCTTGATGGAACCACTGACGTTACGAGAACTATGCACTTCGGAAAACCA
EST: GTGCTGAGATGCAACCTGATTCCATGTATTTGTGTGACTCAGGCGGTCAG TACCTTGATGGAACCACTGACGTTACGAGAACTATGCACTTCGGAAAACCA
genomic: GTGCTGAGATGCAACCTGATTCCATGTATTTGTGTGACTCAGGCGGTCAGgtgaggctcg ... ggttgtgaagTACCTTGATGGAACCACTGACGTTACGAGAACTATGCACTTCGGAAAACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGTAGGAGGAAATGCAGCCATTATCCACTATGCAGCCAAGAAAGAGACTTGTGCTGAGATGCAACCTGATTCCATGTATTTGTGTGACTCAGGCGGTCAGgtgaggctcgctctagtttagcttcttgattgttcgggttcagatagtgatactttgttttgcacatagctgttgattttgtgctttagttacatgtgct
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