1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatgtccctgcaccaattcgctgtcatgtggagaaaaaggtggtagacaagacagaggtggccttatcatggtttgggggtgtggcgaggtgaatcgatctttgaactgtccacgttctgaccgtgagggatgtttatggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAAAGGACCCCGACCAGTTCGCGCTGTTGAAGGTGAAGGAGATCAAGAACG
species | Physcomitrella patens |
transcript | PP1S628_7V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162174525|gb|FC350180.1|FC350180
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162161781|gb|FC337909.1|FC337909
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGEST: gi|7067555|gb|AW497410.1|AW497410
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCG
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162193108|gb|FC371493.1|FC371493
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162225032|gb|FC401448.1|FC401448
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162241896|gb|FC414420.1|FC414420
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208347413|gb|DC909748.1|DC909748
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACA-GTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATEST: gi|162174524|gb|FC350179.1|FC350179
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCAT
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|100410674|gb|BY992213.1|BY992213
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162253156|gb|FC428988.1|FC428988
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162202901|gb|FC380286.1|FC380286
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208346866|gb|DC905424.1|DC905424
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTGGGATAGGCTGCACCCAGAAGGTGCATTCGACCCTTTGGGGCTNGCAEST: gi|208346557|gb|DC916823.1|DC916823
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162236455|gb|FC412822.1|FC412822
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|100376765|gb|BY949454.1|BY949454
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTTGGGCTTGCAEST: gi|162156101|gb|FC332268.1|FC332268
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162247403|gb|FC421446.1|FC421446
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162253519|gb|FC429542.1|FC429542
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|67699195|gb|BJ959428.1|BJ959428
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162241897|gb|FC414421.1|FC414421
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162251238|gb|FC428517.1|FC428517
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162240080|gb|FC414905.1|FC414905
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162193109|gb|FC371494.1|FC371494
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|67692095|gb|BJ952328.1|BJ952328
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162153132|gb|FC329538.1|FC329538
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162195051|gb|FC371352.1|FC371352
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208351135|gb|DC921353.1|DC921353
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162247402|gb|FC421445.1|FC421445
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162253520|gb|FC429543.1|FC429543
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|37822165|gb|BJ580231.1|BJ580231
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162219018|gb|FC394913.1|FC394913
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATEST: gi|208374875|gb|DC956148.1|DC956148
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCAT
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162219285|gb|FC395281.1|FC395281
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162274366|gb|FC450393.1|FC450393
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCEST: gi|162237110|gb|FC413269.1|FC413269
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGC
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGGCTTGCEST: gi|162216521|gb|FC392418.1|FC392418
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGG-CTTGC
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|67697506|gb|BJ957739.1|BJ957739
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|100411930|gb|BY992410.1|BY992410
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162274365|gb|FC450392.1|FC450392
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162214539|gb|FC391506.1|FC391506
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|67577835|gb|BJ950002.1|BJ950002
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGEST: gi|162216522|gb|FC392419.1|FC392419
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCG
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|6227402|gb|AW156001.1|AW156001
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: CTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162206674|gb|FC382432.1|FC382432
genomic: CTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162153188|gb|FC329594.1|FC329594
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162160912|gb|FC337469.1|FC337469
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|67720541|gb|BJ970800.1|BJ970800
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208346153|gb|DC917106.1|DC917106
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162153133|gb|FC329539.1|FC329539
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGGCT-GCEST: gi|6102198|gb|AW126668.1|AW126668
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGG-CTTGC
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162241737|gb|FC417264.1|FC417264
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162225031|gb|FC401447.1|FC401447
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208344427|gb|DC916764.1|DC916764
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|67695872|gb|BJ956105.1|BJ956105
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|19787747|gb|BQ040668.1|BQ040668
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162156102|gb|FC332269.1|FC332269
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162214540|gb|FC391507.1|FC391507
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162236454|gb|FC412821.1|FC412821
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162161780|gb|FC337908.1|FC337908
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162274510|gb|FC450745.1|FC450745
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208367634|gb|DC954993.1|DC954993
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162237661|gb|FC413692.1|FC413692
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162264448|gb|FC441121.1|FC441121
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: GTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAEST: gi|162240555|gb|FC416043.1|FC416043
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162241736|gb|FC417263.1|FC417263
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162160913|gb|FC337470.1|FC337470
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208375644|gb|DC902861.1|DC902861
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCEST: gi|162237109|gb|FC413268.1|FC413268
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACC
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|208382319|gb|DC919307.1|DC919307
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162251237|gb|FC428516.1|FC428516
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|100415652|gb|BY992938.1|BY992938
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TGGAGGAGCTGAGTACTACAGATCGACTAANCA-GTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCCTTTGGGGCTTGCEST: gi|208390232|gb|DC941997.1|DC941997
genomic: TGGAGGAGCTGAGTACTACAGATCGACTAA-CAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCC-TTTGGGGCTTGC
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGNATCG GACTTGGATAGNCTGCACCCAGGANGTGCATTCEST: gi|162219284|gb|FC395280.1|FC395280
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTC
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162219017|gb|FC394912.1|FC394912
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAEST: gi|162225310|gb|FC402076.1|FC402076
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
EST: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCG GACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
genomic: TTGGAGGAGCTGAGTACTACAGATCGACTAACAAGTCTCCCCTCGGATCGgtatgtccct ... tggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCA
aatcgatctttgaactgtccacgttctgaccgtgagggatgtttatggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAAAGGACCCCGACCAGTTCGCGCTGTTGAAGGTGAAGGAGATCAAGAACG
ttctgac putative branch site (score: 121)
atgtttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgtccctgcaccaattcgctgtcatgtggagaaaaaggtggtagacaagacagaggtggccttatcatggtttgggggtgtggcgaggtgaatcgatctttgaactgtccacgttctgaccgtgagggatgtttatggattgcagGACTTGGATAGGCTGCACCCAGGAGGTGCATTCGACCCTTTGGGGCTTGCAAAGGACCCCGACCAGTTCGCGCTGTTGAAGGTGAAGGAGATCAAGAACG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC