Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgctactgtgtctttccgtgctactccgagtcggccaatttccgagcagcctctgctgtgtagatgctgtgcgtagagaagtccatgtggacgtaggcatatcattctgatgaactgagtctaatcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACCGTTCCCATCAACCTGGCCGCCGCCGTGATTGCCGAAGTTATCCTGGTTG

Basic information

species Physcomitrella patens
transcript PP1S628_7V6.1
intron # 4
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162202902|gb|FC380287.1|FC380287
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162174525|gb|FC350180.1|FC350180
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162161781|gb|FC337909.1|FC337909
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|7067555|gb|AW497410.1|AW497410
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162193108|gb|FC371493.1|FC371493
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162225032|gb|FC401448.1|FC401448
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162241896|gb|FC414420.1|FC414420
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208347413|gb|DC909748.1|DC909748
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162174524|gb|FC350179.1|FC350179
EST:     ATTC-ACNAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: ATTCAAC-AAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100410674|gb|BY992213.1|BY992213
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162253156|gb|FC428988.1|FC428988
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162202901|gb|FC380286.1|FC380286
EST:     GCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208346866|gb|DC905424.1|DC905424
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208346557|gb|DC916823.1|DC916823
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100376765|gb|BY949454.1|BY949454
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208380608|gb|DC903198.1|DC903198
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162156101|gb|FC332268.1|FC332268
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTTGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162247403|gb|FC421446.1|FC421446
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162253519|gb|FC429542.1|FC429542
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67699195|gb|BJ959428.1|BJ959428
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162241897|gb|FC414421.1|FC414421
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162274511|gb|FC450746.1|FC450746
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTC
EST: gi|162251238|gb|FC428517.1|FC428517
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162193109|gb|FC371494.1|FC371494
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100406447|gb|BY955631.1|BY955631
EST:     TTTTCA-CAAGT-CGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGGAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCAATCA-GTACTTCGGAGCCAC
genomic: TT--CAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCA-TCAAGTACTTCGGAGCCAC
EST: gi|162153132|gb|FC329538.1|FC329538
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162195051|gb|FC371352.1|FC371352
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208351135|gb|DC921353.1|DC921353
EST:     AGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: AGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162247402|gb|FC421445.1|FC421445
EST:     GCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162253520|gb|FC429543.1|FC429543
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|37822165|gb|BJ580231.1|BJ580231
EST:     CCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162219018|gb|FC394913.1|FC394913
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100429840|gb|BY978115.1|BY978115
EST:     ATTCAACAAGTTCGGAGCCGTCTGCGGCCCTTGA-GCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGGAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: ATTCAACAAGTTCGGAGCCGTCTGCGGCCCT-GAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208374875|gb|DC956148.1|DC956148
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         GCTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162219285|gb|FC395281.1|FC395281
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162274366|gb|FC450393.1|FC450393
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162237110|gb|FC413269.1|FC413269
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100358347|gb|BY983859.1|BY983859
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162216521|gb|FC392418.1|FC392418
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67697506|gb|BJ957739.1|BJ957739
EST:     CGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100373966|gb|BY967879.1|BY967879
EST:     TTTCAACA-GTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAAG                         ACTG-AGCATTGCTGCTGGAA
genomic: TT-CAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAA-Ggtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAA
EST: gi|100411930|gb|BY992410.1|BY992410
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162274365|gb|FC450392.1|FC450392
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100385042|gb|BY987505.1|BY987505
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGGAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|19790106|gb|BQ041699.1|BQ041699
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162214539|gb|FC391506.1|FC391506
EST:     CAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67577835|gb|BJ950002.1|BJ950002
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162216522|gb|FC392419.1|FC392419
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100413952|gb|BY975050.1|BY975050
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162153188|gb|FC329594.1|FC329594
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208359589|gb|DC943159.1|DC943159
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         GCTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162160912|gb|FC337469.1|FC337469
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67720541|gb|BJ970800.1|BJ970800
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208346153|gb|DC917106.1|DC917106
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162153133|gb|FC329539.1|FC329539
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100374459|gb|BY985801.1|BY985801
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATNCA-GTACTTCGGAGCCAC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCAT-CAAGTACTTCGGAGCCAC
EST: gi|67572500|gb|BJ945324.1|BJ945324
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162241737|gb|FC417264.1|FC417264
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67568888|gb|BJ941712.1|BJ941712
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|19786216|gb|BQ040450.1|BQ040450
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162225031|gb|FC401447.1|FC401447
EST:     AGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTGGGAGCCACC
genomic: AGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208344427|gb|DC916764.1|DC916764
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67695872|gb|BJ956105.1|BJ956105
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162156102|gb|FC332269.1|FC332269
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100384673|gb|BY950663.1|BY950663
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCANGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162214540|gb|FC391507.1|FC391507
EST:     CAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162161780|gb|FC337908.1|FC337908
EST:     GCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTTGGAGCCACC
genomic: GCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100446890|gb|CJ971189.1|CJ971189
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162274510|gb|FC450745.1|FC450745
EST:     AGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTTGGAGCCACC
genomic: AGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100452434|gb|CJ975269.1|CJ975269
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGANCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208367634|gb|DC954993.1|DC954993
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100392679|gb|BY971830.1|BY971830
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGTTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCCAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162237661|gb|FC413692.1|FC413692
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162264448|gb|FC441121.1|FC441121
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162241736|gb|FC417263.1|FC417263
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208384855|gb|DC907468.1|DC907468
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67574114|gb|BJ946938.1|BJ946938
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162153189|gb|FC329595.1|FC329595
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162160913|gb|FC337470.1|FC337470
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208375644|gb|DC902861.1|DC902861
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162237109|gb|FC413268.1|FC413268
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208382319|gb|DC919307.1|DC919307
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCNTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208376708|gb|DC902917.1|DC902917
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAANGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162251237|gb|FC428516.1|FC428516
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|100415652|gb|BY992938.1|BY992938
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208390232|gb|DC941997.1|DC941997
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162219284|gb|FC395280.1|FC395280
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162219017|gb|FC394912.1|FC394912
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162225310|gb|FC402076.1|FC402076
EST:     CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAG                         ACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 87

CCATGCGCGTTGGGCTATGTTGGGAGCCGCTGGGTTTGTTCTTCCCGAGGCATTCAACAAGTTCGGAGCCGTCTGCGGCCCTGAAGCCGTCTGGTGGAAGgtatgctact ... atcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACCGTTCCCATCAACCTGGCCGCCGCCGTGATTGCCGAAGTTATCCTGGTTG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aagtccatgtggacgtaggcatatcattctgatgaactgagtctaatcttatcagACTGGAGCATTGCTGCTGGAAGGTGACTCCATCAAGTACTTCGGAGCCACCGTTCCCATCAACCTGGCCGCCGCCGTGATTGCCGAAGTTATCCTGGTTG
                                        gtctaat  putative branch site (score: 87)
                                              tcttatc  CT-rich tract
                                           taatcttat  TA-rich tract