1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...cttttgtgcctcgaagtaggaatgtgtttggtcgttgtagctgttatgctctatatttacagttgcagtgtctgactagtcattgtttgcgacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGATTCCTGCGTACCTCACCGGAGAAGTCCCCGGAGA
species | Physcomitrella patens |
transcript | PP1S628_7V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162174525|gb|FC350180.1|FC350180
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162161781|gb|FC337909.1|FC337909
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162225032|gb|FC401448.1|FC401448
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208347413|gb|DC909748.1|DC909748
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67572872|gb|BJ945696.1|BJ945696
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100410674|gb|BY992213.1|BY992213
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208346866|gb|DC905424.1|DC905424
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100376765|gb|BY949454.1|BY949454
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208380608|gb|DC903198.1|DC903198
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162247403|gb|FC421446.1|FC421446
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67570056|gb|BJ942880.1|BJ942880
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162241897|gb|FC414421.1|FC414421
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162274511|gb|FC450746.1|FC450746
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67702050|gb|BJ962283.1|BJ962283
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAEST: gi|162193109|gb|FC371494.1|FC371494
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100406447|gb|BY955631.1|BY955631
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67572822|gb|BJ945646.1|BJ945646
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162195051|gb|FC371352.1|FC371352
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162219018|gb|FC394913.1|FC394913
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100429840|gb|BY978115.1|BY978115
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162219285|gb|FC395281.1|FC395281
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162274366|gb|FC450393.1|FC450393
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162237110|gb|FC413269.1|FC413269
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100358347|gb|BY983859.1|BY983859
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|7207165|gb|AW561168.1|AW561168
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100373966|gb|BY967879.1|BY967879
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100411930|gb|BY992410.1|BY992410
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100385042|gb|BY987505.1|BY987505
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|19790106|gb|BQ041699.1|BQ041699
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67577835|gb|BJ950002.1|BJ950002
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162216522|gb|FC392419.1|FC392419
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100413952|gb|BY975050.1|BY975050
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208359589|gb|DC943159.1|DC943159
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67720541|gb|BJ970800.1|BJ970800
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: TCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162153133|gb|FC329539.1|FC329539
genomic: TCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100374459|gb|BY985801.1|BY985801
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACAAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67572500|gb|BJ945324.1|BJ945324
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162241737|gb|FC417264.1|FC417264
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67568888|gb|BJ941712.1|BJ941712
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|19786216|gb|BQ040450.1|BQ040450
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162156102|gb|FC332269.1|FC332269
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100384673|gb|BY950663.1|BY950663
genomic: GAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|18343015|gb|BJ175052.1|BJ175052
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100446890|gb|CJ971189.1|CJ971189
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100452434|gb|CJ975269.1|CJ975269
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100392679|gb|BY971830.1|BY971830
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162264448|gb|FC441121.1|FC441121
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208384855|gb|DC907468.1|DC907468
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|67574114|gb|BJ946938.1|BJ946938
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162153189|gb|FC329595.1|FC329595
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|18327358|gb|BJ159360.1|BJ159360
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162160913|gb|FC337470.1|FC337470
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208375644|gb|DC902861.1|DC902861
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208376708|gb|DC902917.1|DC902917
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|100415652|gb|BY992938.1|BY992938
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|208390232|gb|DC941997.1|DC941997
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGAEST: gi|162225310|gb|FC402076.1|FC402076
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
EST: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACG GTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
genomic: GAACACTAAGGTGAATGTTCCCAGCAACGAGGAGTTGGCCAAGTGGTACGgtaagtattg ... gacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGA
atgctctatatttacagttgcagtgtctgactagtcattgtttgcgacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGATTCCTGCGTACCTCACCGGAGAAGTCCCCGGAGA
gtctgac putative branch site (score: 115)
tatatttaca TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cttttgtgcctcgaagtaggaatgtgtttggtcgttgtagctgttatgctctatatttacagttgcagtgtctgactagtcattgtttgcgacaacgcagGTCCTGATAGGAGGATTTACTTGCCCGAGGGTCTTTTGGCCAAGGATGAGATTCCTGCGTACCTCACCGGAGAAGTCCCCGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
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