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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttatagttccaataattttgtattctcctgtgttatggggctgcgta...

Basic information

species Oryza sativa
transcript LOC_Os08g03290.3
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GRMZM2G180625_T02 (Zea mays), 5'ss of exon 8
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaa-aatcctctttatagttccaataattttgtattc--tcctgtgttatggggctgcgta
||||||| ||||| ||||||||||| || |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||| | || || | || | |||||||| | | || | || | | | | | ||| | | | || |||| || | |
CCACCCAGAAGACTGTTGATGGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCCAGCAGCACCGGTGCTGCCAAGgtatatgataaaatacacaatgttgcatgca-atcaactctgtaatggttgtttgcacaaactagttaaatcaaccattgattctctgttttgtgttcact--

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GRMZM2G046804_T02 (Zea mays), 5'ss of exon 8
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttatagt--tccaataattttgtattctcctgtgttatggggctgcgta-
||||||| || || ||||| ||||| || |||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| ||||||||||| ||| | | | | || | | | | | || ||||| | | | | | | | | | || ||| |
CCACCCAGAAAACTGTTGACGGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCTAGCAGCACCGGTGCTGCCAAGgtatagtgattgcaactacact-caaatttatgttctctacctaca-tcttctttgtgatgattctggagcatcacaacatga-attttcaactactgagggt

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA04G36860.2 (Glycine max), 5'ss of exon 7
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttatagttccaataattttgta-ttctcctgtgttatgggg---ctgcgta--
||||||| ||||| |||||||| || || ||| |||||||| ||||| || || || |||||||||||||| ||||||||||| |||||||| || | || | |||| ||||| | || | | | | | || | || || | || | || | ||| | | ||| | |
CCACCCAGAAGACTGTTGATGGGCCATCAGCCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGgtgaat-attttatatgatgtgctgcatcttgctcttgagcactatttttattgtttattgtcagtactattttggttttactgattcctaccttttctgtgcaag

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA05G06420.1 (Glycine max), 5'ss of exon 7
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgt-tgtgcatgcacaaccacagttcaaaatcctctttatagttccaataattttgtattctcctgtgttatggggctgcgta
|||| |||||||| ||||||||||| || | ||||||||||| ||||| || || || || |||||||||||| || |||||||| ||||| || ||| | | | ||| || ||| | | || || ||| |||| | | ||| | | ||| | | ||
CCACTCAAAAGACTGTTGATGGACCATCAATGAAGGACTGGAGAGGTGGAAGAGCTGCTTCTTGTAACATCATTCCTAGTAGCACTGGAGCTGCTAAGgtatctagcatatgtgaatacatgcacatccctttctctcattgttcatgtgatttcaagttttagttgctttaagggatagttgaccttggaacag-ata

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA04G36870.1 (Glycine max), 5'ss of exon 8
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttatagttccaataattttgta-ttctcctgtgttatgggg---ctgcgta--
| ||||| ||||| |||||||| || || ||| |||||||| ||||| || || || |||||||||||||| ||||||||||| |||||||| || | || | |||| ||||| | || ||| | | | || | || || |||| | || | ||| | | ||| | |
CTACCCAGAAGACTGTTGATGGGCCATCAGCCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGgtgaat-attttatatgatgtgctgcatcttgctcttgagcacaatttttattgtttattgtcagtacttttttggttttactgattcctactttttctgtgcaag

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA06G18120.1 (Glycine max), 5'ss of exon 8
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttca-atgttgtgca--tgcacaaccac-agttcaaaatcctctttatagttccaataattttgta-ttctcctg--tgttatggggctgcgta--
| ||||| ||||| |||||||| || || |||||||||||| ||||| || || || |||||||||||||| ||||||||||| |||||||| || | | | | | |||||||| | | | | | ||| || || | ||| | |||| | || | ||| | ||| ||| | |
CTACCCAGAAGACTGTTGATGGGCCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGgtgaatattttatatgatatgttgtgttgtttcttgctcgtgaacacttaattttcattgtttagtcaacacttttttggttttactgattcctatttttctgtgcaag

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA06G18110.5 (Glycine max), 5'ss of exon 8
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgt------catgaacttcaatgttgtg-catgcacaaccacagttcaaaatcctctttatagttccaataattttgtattctcctgtgttatggggctgcgta------
| ||||| ||||| ||||||||||| || |||||||||||| ||||| || || || |||||||||||||| ||||||||||| |||||||| || | |||| | |||||| | ||| || ||| | | |||||||| | | |||| | | | || | |
CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGgtgaatattttatatgatttgttgtgttgtttcttgctcatgaacaccaaatttaattgtttatagtcaacacatttttttggttttactgattcctactttttttgtgcaag

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: Vv01s0010g02460.t01 (Vitis vinifera), 5'ss of exon 8
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttat--agttccaataattttgt--attctcctgtgttatggggctgcgta-------------------------
|||| || |||||||||||||| || || |||||||||||||| ||||| || || || || |||||||| ||||||||||||||||||||||| |||| | | || | | | | || | | | | ||| || |||| |||||| || | | || | ||
CCACACAGAAGACCGTTGATGGGCCATCAAGCAAGGACTGGAGAGGTGGAAGAGCTGCTTCCTTCAACATCATCCCCAGCAGCACTGGTGCTGCCAAGgtacttagcttagttatcgagcagaggtctatgatttccattagatcttccttgtattgggtctcaatgattttgatggtttgcacatcaaatcatccaaagtccaatccattttttgtgatcatatag

upper sequence: LOC_Os08g03290.3 (Oryza sativa), 5'ss of exon 7
lower sequence: Vv14s0171g00440.t01 (Vitis vinifera), 5'ss of exon 7
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttatagttccaataattttgtattctcctgtgttatggggctgcgta
| || |||||||| ||||||||||| || | ||||| ||||| |||||||| || ||| ||| ||||| ||||||||||||||||||||||| || ||| | || | || || || || ||||| || | | | ||| | | | | | | | ||| | |
CTACACAAAAGACAGTTGATGGACCATCAATGAAGGATTGGAGAGGTGGCAGAGCTGCCTCTTTCAACATTATTCCCAGCAGCACTGGTGCTGCAAAGgtattaaaatgacctgcat-ccatggattcaaaaccaatcttttggttatcataaacagtaatacgactaatatgtctgtgtttgtgaag----------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58669365|gb|CK058051.1|CK058051
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|8527527|gb|AU092342.1|AU092342
EST:     CCAGTTTTAACATCATTCCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGNTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: CCAGTTTTAACATCATT-CCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|8528318|gb|AU093133.1|AU093133
EST:     TTTTAACATCATTCCCAAGCAGCCACTGGTGCTGCCAAA                         GCTGTTGCCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: TTTTAACATCATTCCC-AGCAG-CACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29618937|gb|CB623949.1|CB623949
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29669182|gb|CB665457.1|CB665457
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218485784|gb|FG945170.1|FG945170
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58680834|gb|CK069521.1|CK069521
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218481567|gb|FG958457.1|FG958457
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|163928248|gb|EG714640.1|EG714640
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACG
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACG
EST: gi|58676445|gb|CK065132.1|CK065132
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58687028|gb|CK075715.1|CK075715
EST:     ACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: ACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218486798|gb|FG964632.1|FG964632
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|163923212|gb|EG711059.1|EG711059
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|14574734|gb|AU197249.1|AU197249
EST:     TCATTCCCAAGCAGCATTGGTGCTCCCAAA                         GCTGTTGNCAAGGTTCTCCCTGATTTGAATGGCAAGCTTACGGNAATGTCC
genomic: TCATTCCC-AGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58587834|gb|CF986142.1|CF986142
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGGCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|22305777|gb|BQ906999.1|BQ906999
EST:     AACATCATTCCCAGCAGCACT-GTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGA-TTGAATGGCAAGCTTACGGGAATGTCC
genomic: AACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|38480389|gb|CF964478.1|CF964478
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218479178|gb|FG963867.1|FG963867
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|10794788|gb|AU108754.1|AU108754
EST:     A-GGCCGCCNAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCCAAA                         GCTGTTGGCAA-GTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTC
genomic: AGGGCGGCC-AGTTTTAACATCATTCCCAGCAGCACTGGTGCTG-CCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTC
EST: gi|29657919|gb|CB654194.1|CB654194
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|163929384|gb|EG713809.1|EG713809
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33690781|gb|CF319020.1|CF319020
EST:     CCAGTTTTAACATCATTTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: CCAGTTTTAACATCA-TTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33691523|gb|CF319762.1|CF319762
EST:     TGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: TGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|11564626|gb|AU165262.1|AU165262
EST:     CCCAGCAAGCACTGNTGCTTGCCAAAA                         GCTGTTGGCAAGGTTTCTTCCTTGATTTGAATGGCAAGCTTACGGGAATG
genomic: CCCAGC-AGCACTGGTGC-TGCC-AAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGG-TTCTTCC-TGATTTGAATGGCAAGCTTACGGGAATG
EST: gi|218501101|gb|FG958200.1|FG958200
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29617661|gb|CB622673.1|CB622673
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29660838|gb|CB657113.1|CB657113
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58586835|gb|CF985143.1|CF985143
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|10611378|gb|AU108265.1|AU108265
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|5851015|gb|AU078187.1|AU078187
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29669216|gb|CB665491.1|CB665491
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTGCGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33798300|gb|CF325007.1|CF325007
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33689473|gb|CF317712.1|CF317712
EST:     TCATTTCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: TCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29658831|gb|CB655106.1|CB655106
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29665516|gb|CB661791.1|CB661791
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218483456|gb|FG953856.1|FG953856
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58589792|gb|CF988100.1|CF988100
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAATGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|7212737|gb|AU062516.2|AU062516
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGT
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGT
EST: gi|38475901|gb|CF960034.1|CF960034
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33794942|gb|CF323351.1|CF323351
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58590609|gb|CF988917.1|CF988917
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|163921618|gb|EG712164.1|EG712164
EST:     GGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218479342|gb|FG956036.1|FG956036
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|55410658|gb|CV723034.1|CV723034
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACTGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218500454|gb|FG951406.1|FG951406
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|38477397|gb|CF961530.1|CF961530
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|11442789|gb|BF430688.1|BF430688
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218494461|gb|FG953576.1|FG953576
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58674350|gb|CK063036.1|CK063036
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218500788|gb|FG960828.1|FG960828
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|572088|gb|D41599.1|D41599
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTNCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218479590|gb|FG967769.1|FG967769
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58692167|gb|CK080854.1|CK080854
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGTCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58661685|gb|CK050365.1|CK050365
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGNTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29644224|gb|CB649231.1|CB649231
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218486502|gb|FG952282.1|FG952282
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218485005|gb|FG945495.1|FG945495
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAGTGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58605719|gb|CK033752.1|CK033752
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|700128|gb|D46419.1|D46419
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58674916|gb|CK063603.1|CK063603
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218494865|gb|FG953212.1|FG953212
EST:     GCAGGGCGGTCAGTTTTAACATCATTCCCAGCAGCACTCGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33654603|gb|CF277217.1|CF277217
EST:     CAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GTTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: CAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33663735|gb|CF294702.1|CF294702
EST:     AGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: AGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218487986|gb|FG954431.1|FG954431
EST:     GCA-GGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|10931175|gb|AU161449.1|AU161449
EST:     GCA-GGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33794940|gb|CF323350.1|CF323350
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|8856638|gb|AU093956.1|AU093956
EST:     NCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218498381|gb|FG959835.1|FG959835
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|396941129|gb|HO188338.1|HO188338
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58685261|gb|CK073948.1|CK073948
EST:     ATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: ATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218494958|gb|FG965713.1|FG965713
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29676409|gb|CB672684.1|CB672684
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29612747|gb|CB617760.1|CB617760
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29657441|gb|CB653716.1|CB653716
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218479754|gb|FG964344.1|FG964344
EST:     CAGGGCGGCCAGTTTTAACATCATTCCCAGACAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: CAGGGCGGCCAGTTTTAACATCATTCCCAG-CAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218494721|gb|FG969778.1|FG969778
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218496015|gb|FG966482.1|FG966482
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58596874|gb|CK007402.1|CK007402
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|87007673|gb|CI287517.1|CI287517
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA
EST: gi|163928370|gb|EG714702.1|EG714702
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29612745|gb|CB617758.1|CB617758
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29687274|gb|CB683549.1|CB683549
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|11170911|gb|AU163530.1|AU163530
EST:     GCAGGCCGCCCAGTTTNAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         -CTGTTGNCAA-GTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218485467|gb|FG958212.1|FG958212
EST:     GTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|38478313|gb|CF962446.1|CF962446
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33801067|gb|CF326406.1|CF326406
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|27553976|gb|CA997876.1|CA997876
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTTC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58675301|gb|CK063988.1|CK063988
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|8527277|gb|AU092092.1|AU092092
EST:     CCAGGCCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58604428|gb|CK014956.1|CK014956
EST:     GCAGGGCGGCCAGTGTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58662784|gb|CK051470.1|CK051470
EST:     CAGGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: CA-GGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29683937|gb|CB680212.1|CB680212
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29681463|gb|CB677738.1|CB677738
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|11442807|gb|BF430706.1|BF430706
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|33656133|gb|CF278747.1|CF278747
EST:     TGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: TGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29640155|gb|CB645164.1|CB645164
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|163927157|gb|EG710246.1|EG710246
EST:     TTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: TTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58689282|gb|CK077969.1|CK077969
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|10794596|gb|AU108562.1|AU108562
EST:     ATCA-TCCCNAGCAGCACTGGTGCTGCCCAAA                         GCTTTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTC
genomic: ATCATTCCC-AGCAGCACTGGTGCTG-CCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTC
EST: gi|14574852|gb|AU197367.1|AU197367
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58597799|gb|CK008327.1|CK008327
EST:     GCAGGGCGGCCAG-TTTAACATCATGCGCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|29676323|gb|CB672598.1|CB672598
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|11564947|gb|AU165583.1|AU165583
EST:     CAGGNCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCCAAA                         GCTGTTGNCAA-GTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATTGT
genomic: CAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTG-CCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA-TGT
EST: gi|218491942|gb|FG966682.1|FG966682
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|58596704|gb|CK007232.1|CK007232
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCC
EST: gi|218499384|gb|FG947815.1|FG947815
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA
EST: gi|58695384|gb|CK084071.1|CK084071
EST:     GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA                         GCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA
genomic: GCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 497

CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatg ... tgcattgcagGCTGTTGGCAAGGTTCTTCCTGATTTGAATGGCAAGCTTACGGGAATGTCCTTCCGTGTTCCCACTGTCGATGTCTCAGTTGTTGATCTCACAGTTAGAA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAgtacgtcatgaacttcaatgttgtgcatgcacaaccacagttcaaaatcctctttatagttccaataattttgtattctcctgtgttatggggctgcgta

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggctgcg