1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GATGTTTGTCTGCGGTGTCAACGAGGACAAGTACACTTCAGATATTGATATTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttctttccgagtgacaattttctactttcagttggacttttggtttggttcttaattgactcgttatcatccaatag
species | Oryza sativa |
transcript | LOC_Os08g03290.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29618937|gb|CB623949.1|CB623949
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29669182|gb|CB665457.1|CB665457
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: AGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|5004389|gb|AU069538.1|AU069538
genomic: AGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58657006|gb|CK045686.1|CK045686
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGACGGTCTGATGACAACTGTTCATEST: gi|163928248|gb|EG714640.1|EG714640
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58676445|gb|CK065132.1|CK065132
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: CCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218486798|gb|FG964632.1|FG964632
genomic: CCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: CCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58587834|gb|CF986142.1|CF986142
genomic: CCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCGCGAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218479178|gb|FG963867.1|FG963867
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: CCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29657919|gb|CB654194.1|CB654194
genomic: CCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: AGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|33793468|gb|CF322616.1|CF322616
genomic: AGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|163929384|gb|EG713809.1|EG713809
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|11172167|gb|AU164149.1|AU164149
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: GTCTCAAATGCTTAGCTGCACCACAAACTGCCTTGCTTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGGTCTGATGACAACTGTTCAEST: gi|218501101|gb|FG958200.1|FG958200
genomic: GTCTCAAATGCT-AGCTGCACCACAAACTGCCTTGCT-CCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGG-TCTGATGACAACTGTTCA
EST: CACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29660838|gb|CB657113.1|CB657113
genomic: CACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58592989|gb|CF991297.1|CF991297
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTEST: gi|5851015|gb|AU078187.1|AU078187
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29665516|gb|CB661791.1|CB661791
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58589792|gb|CF988100.1|CF988100
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACGACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|7212737|gb|AU062516.2|AU062516
genomic: TCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|568853|gb|D39702.1|D39702
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|33794942|gb|CF323351.1|CF323351
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|38477397|gb|CF961530.1|CF961530
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|11442789|gb|BF430688.1|BF430688
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218494461|gb|FG953576.1|FG953576
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58674350|gb|CK063036.1|CK063036
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218500788|gb|FG960828.1|FG960828
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|572088|gb|D41599.1|D41599
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|55828142|gb|AU062584.3|AU062584
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58679933|gb|CK068620.1|CK068620
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGGACCACAAACTGGCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218479590|gb|FG967769.1|FG967769
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58692167|gb|CK080854.1|CK080854
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29644224|gb|CB649231.1|CB649231
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218486502|gb|FG952282.1|FG952282
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTC-TCTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAEST: gi|58685936|gb|CK074623.1|CK074623
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCAT-TCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCA
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218485005|gb|FG945495.1|FG945495
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|700128|gb|D46419.1|D46419
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: GCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58674916|gb|CK063603.1|CK063603
genomic: GCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218494865|gb|FG953212.1|FG953212
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|56158068|gb|C72316.2|C72316
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTEST: gi|33794940|gb|CF323350.1|CF323350
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58595573|gb|CK006101.1|CK006101
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGGCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218494958|gb|FG965713.1|FG965713
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29612747|gb|CB617760.1|CB617760
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218479754|gb|FG964344.1|FG964344
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGTTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218489362|gb|FG964814.1|FG964814
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218494721|gb|FG969778.1|FG969778
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218496015|gb|FG966482.1|FG966482
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58596874|gb|CK007402.1|CK007402
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: CCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|87007673|gb|CI287517.1|CI287517
genomic: CCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|163928370|gb|EG714702.1|EG714702
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29612745|gb|CB617758.1|CB617758
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|33801067|gb|CF326406.1|CF326406
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|27553976|gb|CA997876.1|CA997876
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58675301|gb|CK063988.1|CK063988
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: CTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACGACTGTTCATEST: gi|163927955|gb|EG714263.1|EG714263
genomic: CTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|33795521|gb|CF323630.1|CF323630
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29683937|gb|CB680212.1|CB680212
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|11442807|gb|BF430706.1|BF430706
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58689282|gb|CK077969.1|CK077969
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|14574852|gb|AU197367.1|AU197367
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|58597799|gb|CK008327.1|CK008327
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTGCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29676323|gb|CB672598.1|CB672598
genomic: TGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCT-CCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: CAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|218499384|gb|FG947815.1|FG947815
genomic: CAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCATEST: gi|29612746|gb|CB617759.1|CB617759
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
EST: TGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTTGCCA-G GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAEST: gi|58695384|gb|CK084071.1|CK084071
genomic: TGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTT-GCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCA
EST: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAG GTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
genomic: TTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttct ... catccaatagGTCATTCATGACAACTTTGGTATTATCGAGGGTCTGATGACAACTGTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGTTTGTCTGCGGTGTCAACGAGGACAAGTACACTTCAGATATTGATATTGTCTCAAATGCTAGCTGCACCACAAACTGCCTTGCTCCTCTTGCCAAGgtatttttctttccgagtgacaattttctactttcagttggacttttggtttggttcttaattgactcgttatcatccaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC