1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...ttgttattctaattcgaagtttcttgctggctctaacttgaattgaacatctgttgttgataaagcgcaaattaacatttattttcaatgtatattgcagCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCAAACATTTTG
species | Oryza sativa |
transcript | LOC_Os01g36080.4 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAG CAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAEST: gi|33678822|gb|CF307061.1|CF307061
genomic: GGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAGgtcccaattt ... tatattgcagCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAA
EST: GGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAG CAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAA
genomic: GGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAGgtcccaattt ... tatattgcagCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAA
aacatctgttgttgataaagcgcaaattaacatttattttcaatgtatattgcagCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCAAACATTTTG
aattaac putative branch site (score: 2)
aaattaacatttattt TA-rich tract