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ATGGTGAATATAGCAAGTGATGATCAAATAAAAAAGGCAGCCAATCTAATTAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctcttcttgactctcttcctcttgctctttcttactacctcctctcctagatattctgtgattctgtttttaacattctagtaagcttcatttg...
species | Glycine max |
transcript | GLYMA20G39280.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTG CCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATGEST: gi|51338223|gb|CO982089.1|CO982089
genomic: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctct ... tatttttcagCCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATG
EST: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTG CCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATGEST: gi|58023867|gb|CX710608.1|CX710608
genomic: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctct ... tatttttcagCCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATG
EST: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTG CCTTGCAGAGACTCTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATGEST: gi|7286265|gb|AW598752.1|AW598752
genomic: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctct ... tatttttcagCCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATG
EST: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTG CCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATGEST: gi|51338238|gb|CO982104.1|CO982104
genomic: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctct ... tatttttcagCCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATG
EST: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTG CCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATG
genomic: TAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctct ... tatttttcagCCTTGCAGAGACACTATGCAGTATTGCAGGCATTGGCACTGGAAGAGGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGTGAATATAGCAAGTGATGATCAAATAAAAAAGGCAGCCAATCTAATTAAGCGTATTGACTTGAAAGATTTTTCTGTATGCCAAATTTCCAACCCTGgtaagcctcttcttgactctcttcctcttgctctttcttactacctcctctcctagatattctgtgattctgtttttaacattctagtaagcttcatttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctcttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttcctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctcctc