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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTGGTATAAGTGTTAATCAACTAAGATCTTTACCTGAAGGAACTACAGCTTTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATTGATCTTTgtaagtgatgttatttattcttttgatatattattactgtgctttttttaaaaataaaataaaattggttctccacttttatttgttgaatttttaacctgggaattattttgcag

Basic information

species Glycine max
transcript GLYMA20G39020.3
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19347272|gb|BM892152.1|BM892152
EST:     CTTTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATTGATCTTT                         GTCACTGTTCCATCATTGGCCTCTGTTTATAATGAGTATGCTTTGAAGAGC
genomic: CTTTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATTGATCTTTgtaagtgatg ... tattttgcagGTCACTGTTCCATCATTGGCCTCTGTTTATAATGAGTATGCTTTGAAGAGC
EST: gi|8827776|gb|BE211506.1|BE211506
EST:     CTNTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATNGATCTTT                         GTCACTGTTCCATCATTGGCCTCTGT
genomic: CTTTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATTGATCTTTgtaagtgatg ... tattttgcagGTCACTGTTCCATCATTGGCCTCTGT
EST: gi|192326776|gb|FK018903.1|FK018903
EST:     CTTTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATTGATCTTT                         GTCACTGTTCCA
genomic: CTTTGGGTCTTCCTGTCACAATGGGTGCATATATCTATACATTGATCTTTgtaagtgatg ... tattttgcagGTCACTGTTCCA