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GCTAGGCATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatatagatctgtgagaaccatatatttttcagatatagagcatttcttcagtgtttaccatttactaggtctacctggggttgaactggattact...
species | Glycine max |
transcript | GLYMA20G39020.3 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATAEST: gi|213598689|gb|DB958189.1|DB958189
genomic: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
EST: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATAEST: gi|8827776|gb|BE211506.1|BE211506
genomic: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
EST: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATAEST: gi|192326776|gb|FK018903.1|FK018903
genomic: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
EST: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATAEST: gi|192298860|gb|FG987605.1|FG987605
genomic: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
EST: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATAEST: gi|193691881|gb|FK629004.1|FK629004
genomic: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
EST: TCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATAEST: gi|21993638|gb|BQ785166.1|BQ785166
genomic: TCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
EST: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAG GCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
genomic: ATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatata ... tcccttgtagGCAGCTCGTAACAATGTCCTTCTGGCAGTTCCCGCACTTCTGTATGCCATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTAGGCATCAAAAAGTTGGGGAGAAGCCTCTTCTCTCAATTTCTACATTTGTGCAGgtactatatagatctgtgagaaccatatatttttcagatatagagcatttcttcagtgtttaccatttactaggtctacctggggttgaactggattact
- - - - - - - - - - GGAGAA
- - - - - - - - - - - AGAAGC