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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAGgtttgtatcgttagatttcattaatcattttattttactgtttgtgaggaacgtttgcatttctaacttgatttgtaaattacag

Basic information

species Glycine max
transcript GLYMA20G38670.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192312788|gb|FK005414.1|FK005414
EST:     CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAG                         AAAGAAGATAACATATCTTGCTCCATCTGCTGGAGAACTTCCAAGCAAGTA
genomic: CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAGgtttgtatcg ... taaattacagAAAGAAGATAACATATCTTGCTCCATCTGCTGGAGAACTTCCAAGCAAGTA
EST: gi|192312789|gb|FK005415.1|FK005415
EST:     CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAG                         AAAGAAGATAACATATCTTGCTCCATCTGCTGGAGAACTTCCAAGCAAGTA
genomic: CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAGgtttgtatcg ... taaattacagAAAGAAGATAACATATCTTGCTCCATCTGCTGGAGAACTTCCAAGCAAGTA
EST: gi|192295419|gb|FG987033.1|FG987033
EST:     CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAG                         AAAGAAGATAACATATCTTGCTCCATCTGCTGGAGAACTTCCAAGCAAGTA
genomic: CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAGgtttgtatcg ... taaattacagAAAGAAGATAACATATCTTGCTCCATCTGCTGGAGAACTTCCAAGCAAGTA
EST: gi|31471671|gb|CD413699.1|CD413699
EST:     CAATGTTGCTGGGTTCATTTATGTAACAGACGTTGACATTCAGAG                         AAAGAAGATAACATATCTTGCTCCATCTGCTGGAGCAACTTCCAAGCAAGT
genomic: CAATGTTGCTGGGTTTATTTATGTAACAGACGTTGACATTCAGAGgtttgtatcg ... taaattacagAAAGAAGATAACATATCTTGCTCCATCTGCTGGAG-AACTTCCAAGCAAGT